Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC34.24■■■■□ 3.07
RPGRIP1LQ68CZ1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
RPGRIP1LQ68CZ1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
RPGRIP1LQ68CZ1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC34.22■■■■□ 3.07
RPGRIP1LQ68CZ1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
RPGRIP1LQ68CZ1 TSPY9P-201ENST00000440215 945 ntBASIC34.21■■■■□ 3.07
RPGRIP1LQ68CZ1 TSPY11P-201ENST00000442607 1045 ntBASIC34.21■■■■□ 3.07
RPGRIP1LQ68CZ1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.21■■■■□ 3.07
RPGRIP1LQ68CZ1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.2■■■■□ 3.07
RPGRIP1LQ68CZ1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.2■■■■□ 3.07
RPGRIP1LQ68CZ1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
RPGRIP1LQ68CZ1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC34.19■■■■□ 3.06
RPGRIP1LQ68CZ1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
RPGRIP1LQ68CZ1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
RPGRIP1LQ68CZ1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
RPGRIP1LQ68CZ1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
RPGRIP1LQ68CZ1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.16■■■■□ 3.06
RPGRIP1LQ68CZ1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.16■■■■□ 3.06
RPGRIP1LQ68CZ1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
RPGRIP1LQ68CZ1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
RPGRIP1LQ68CZ1 GAK-223ENST00000628912 497 ntTSL 5 BASIC34.16■■■■□ 3.06
RPGRIP1LQ68CZ1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC34.16■■■■□ 3.06
RPGRIP1LQ68CZ1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC34.15■■■■□ 3.06
RPGRIP1LQ68CZ1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
RPGRIP1LQ68CZ1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
RPGRIP1LQ68CZ1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC34.13■■■■□ 3.05
RPGRIP1LQ68CZ1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC34.13■■■■□ 3.05
RPGRIP1LQ68CZ1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
RPGRIP1LQ68CZ1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC34.12■■■■□ 3.05
RPGRIP1LQ68CZ1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.12■■■■□ 3.05
RPGRIP1LQ68CZ1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
RPGRIP1LQ68CZ1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC34.12■■■■□ 3.05
RPGRIP1LQ68CZ1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC34.12■■■■□ 3.05
RPGRIP1LQ68CZ1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
RPGRIP1LQ68CZ1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC34.11■■■■□ 3.05
RPGRIP1LQ68CZ1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.11■■■■□ 3.05
RPGRIP1LQ68CZ1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.11■■■■□ 3.05
RPGRIP1LQ68CZ1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC34.11■■■■□ 3.05
RPGRIP1LQ68CZ1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.11■■■■□ 3.05
RPGRIP1LQ68CZ1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC34.11■■■■□ 3.05
RPGRIP1LQ68CZ1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
RPGRIP1LQ68CZ1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC34.1■■■■□ 3.05
RPGRIP1LQ68CZ1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC34.1■■■■□ 3.05
RPGRIP1LQ68CZ1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
RPGRIP1LQ68CZ1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC34.09■■■■□ 3.05
RPGRIP1LQ68CZ1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
RPGRIP1LQ68CZ1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.09■■■■□ 3.05
RPGRIP1LQ68CZ1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC34.08■■■■□ 3.05
RPGRIP1LQ68CZ1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC34.08■■■■□ 3.05
RPGRIP1LQ68CZ1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.08■■■■□ 3.05
RPGRIP1LQ68CZ1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
RPGRIP1LQ68CZ1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.07■■■■□ 3.05
RPGRIP1LQ68CZ1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC34.07■■■■□ 3.05
RPGRIP1LQ68CZ1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC34.07■■■■□ 3.05
RPGRIP1LQ68CZ1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC34.07■■■■□ 3.04
RPGRIP1LQ68CZ1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC34.07■■■■□ 3.04
RPGRIP1LQ68CZ1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC34.07■■■■□ 3.04
RPGRIP1LQ68CZ1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
RPGRIP1LQ68CZ1 AC131281.2-201ENST00000520478 145 ntBASIC34.06■■■■□ 3.04
RPGRIP1LQ68CZ1 AC010997.5-201ENST00000609182 354 ntBASIC34.06■■■■□ 3.04
RPGRIP1LQ68CZ1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
RPGRIP1LQ68CZ1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
RPGRIP1LQ68CZ1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC34.06■■■■□ 3.04
RPGRIP1LQ68CZ1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
RPGRIP1LQ68CZ1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC34.05■■■■□ 3.04
RPGRIP1LQ68CZ1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.05■■■■□ 3.04
RPGRIP1LQ68CZ1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.05■■■■□ 3.04
RPGRIP1LQ68CZ1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.05■■■■□ 3.04
RPGRIP1LQ68CZ1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC34.05■■■■□ 3.04
RPGRIP1LQ68CZ1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
RPGRIP1LQ68CZ1 AL117332.1-201ENST00000622628 974 ntBASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 MIR3621-201ENST00000580529 85 ntBASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 MIR6724-1-201ENST00000616420 92 ntBASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 MIR6724-2-201ENST00000616483 92 ntBASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 MIR6724-4-201ENST00000617390 92 ntBASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 MIR6724-3-201ENST00000622482 92 ntBASIC34.04■■■■□ 3.04
RPGRIP1LQ68CZ1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
RPGRIP1LQ68CZ1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC34.03■■■■□ 3.04
RPGRIP1LQ68CZ1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
RPGRIP1LQ68CZ1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC34.03■■■■□ 3.04
RPGRIP1LQ68CZ1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.02■■■■□ 3.04
RPGRIP1LQ68CZ1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.02■■■■□ 3.04
RPGRIP1LQ68CZ1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.02■■■■□ 3.04
RPGRIP1LQ68CZ1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC34.02■■■■□ 3.04
RPGRIP1LQ68CZ1 AF131216.4-201ENST00000638924 1588 ntBASIC34.01■■■■□ 3.03
RPGRIP1LQ68CZ1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
RPGRIP1LQ68CZ1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC34.01■■■■□ 3.03
RPGRIP1LQ68CZ1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.01■■■■□ 3.03
RPGRIP1LQ68CZ1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
RPGRIP1LQ68CZ1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
RPGRIP1LQ68CZ1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
RPGRIP1LQ68CZ1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC34■■■■□ 3.03
RPGRIP1LQ68CZ1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms