Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBE2D3P61077 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
UBE2D3P61077 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2D3P61077 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2D3P61077 AC025884.2-201ENST00000553429 711 ntBASIC16.8■□□□□ 0.28
UBE2D3P61077 AC060814.1-201ENST00000554326 538 ntBASIC16.8■□□□□ 0.28
UBE2D3P61077 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBE2D3P61077 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2D3P61077 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2D3P61077 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2D3P61077 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D3P61077 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D3P61077 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2D3P61077 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D3P61077 AC097639.1-201ENST00000565519 1891 ntBASIC16.79■□□□□ 0.28
UBE2D3P61077 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D3P61077 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D3P61077 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2D3P61077 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D3P61077 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D3P61077 AC138932.3-201ENST00000567634 1902 ntBASIC16.78■□□□□ 0.28
UBE2D3P61077 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D3P61077 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBE2D3P61077 MIR3960-201ENST00000583311 91 ntBASIC16.78■□□□□ 0.28
UBE2D3P61077 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2D3P61077 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D3P61077 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D3P61077 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2D3P61077 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D3P61077 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D3P61077 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D3P61077 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D3P61077 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D3P61077 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D3P61077 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D3P61077 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2D3P61077 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2D3P61077 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
UBE2D3P61077 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2D3P61077 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2D3P61077 MIR639-201ENST00000384974 98 ntBASIC16.76■□□□□ 0.27
UBE2D3P61077 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2D3P61077 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBE2D3P61077 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2D3P61077 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2D3P61077 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2D3P61077 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2D3P61077 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2D3P61077 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.75■□□□□ 0.27
UBE2D3P61077 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2D3P61077 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2D3P61077 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2D3P61077 AC068473.5-201ENST00000616428 2072 ntBASIC16.74■□□□□ 0.27
UBE2D3P61077 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2D3P61077 SMPD5-203ENST00000639008 1464 ntBASIC16.74■□□□□ 0.27
UBE2D3P61077 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.74■□□□□ 0.27
UBE2D3P61077 AC092296.2-201ENST00000589470 999 ntBASIC16.74■□□□□ 0.27
UBE2D3P61077 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2D3P61077 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2D3P61077 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2D3P61077 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBE2D3P61077 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2D3P61077 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.73■□□□□ 0.27
UBE2D3P61077 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.73■□□□□ 0.27
UBE2D3P61077 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UBE2D3P61077 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2D3P61077 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2D3P61077 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2D3P61077 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
UBE2D3P61077 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2D3P61077 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBE2D3P61077 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
UBE2D3P61077 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2D3P61077 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.72■□□□□ 0.27
UBE2D3P61077 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2D3P61077 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBE2D3P61077 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBE2D3P61077 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2D3P61077 AL139125.2-201ENST00000623134 1869 ntBASIC16.71■□□□□ 0.27
UBE2D3P61077 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBE2D3P61077 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2D3P61077 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2D3P61077 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms