Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS3P49746 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.47■□□□□ 0.71
THBS3P49746 SMPD5-203ENST00000639008 1464 ntBASIC19.47■□□□□ 0.71
THBS3P49746 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS3P49746 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS3P49746 AC097639.1-201ENST00000565519 1891 ntBASIC19.46■□□□□ 0.71
THBS3P49746 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
THBS3P49746 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS3P49746 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS3P49746 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
THBS3P49746 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS3P49746 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS3P49746 AC022211.4-201ENST00000625094 2161 ntBASIC19.46■□□□□ 0.71
THBS3P49746 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS3P49746 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS3P49746 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS3P49746 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS3P49746 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.45■□□□□ 0.7
THBS3P49746 AC092296.2-201ENST00000589470 999 ntBASIC19.45■□□□□ 0.7
THBS3P49746 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS3P49746 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.45■□□□□ 0.7
THBS3P49746 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS3P49746 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THBS3P49746 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
THBS3P49746 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
THBS3P49746 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS3P49746 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS3P49746 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
THBS3P49746 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.44■□□□□ 0.7
THBS3P49746 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.44■□□□□ 0.7
THBS3P49746 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.43■□□□□ 0.7
THBS3P49746 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.43■□□□□ 0.7
THBS3P49746 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
THBS3P49746 ECEL1P2-201ENST00000461596 1295 ntBASIC19.43■□□□□ 0.7
THBS3P49746 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
THBS3P49746 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS3P49746 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS3P49746 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS3P49746 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS3P49746 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.42■□□□□ 0.7
THBS3P49746 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS3P49746 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS3P49746 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.42■□□□□ 0.7
THBS3P49746 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
THBS3P49746 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS3P49746 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
THBS3P49746 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.41■□□□□ 0.7
THBS3P49746 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
THBS3P49746 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS3P49746 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS3P49746 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS3P49746 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
THBS3P49746 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS3P49746 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS3P49746 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
THBS3P49746 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS3P49746 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS3P49746 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS3P49746 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
THBS3P49746 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
THBS3P49746 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
THBS3P49746 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
THBS3P49746 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
THBS3P49746 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS3P49746 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
THBS3P49746 AC138932.3-201ENST00000567634 1902 ntBASIC19.39■□□□□ 0.69
THBS3P49746 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS3P49746 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS3P49746 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS3P49746 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS3P49746 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.38■□□□□ 0.69
THBS3P49746 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS3P49746 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS3P49746 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.37■□□□□ 0.69
THBS3P49746 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
THBS3P49746 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.37■□□□□ 0.69
THBS3P49746 RP9P-202ENST00000450133 1212 ntBASIC19.37■□□□□ 0.69
THBS3P49746 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.37■□□□□ 0.69
THBS3P49746 NTF6A-201ENST00000591175 560 ntBASIC19.37■□□□□ 0.69
THBS3P49746 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS3P49746 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS3P49746 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS3P49746 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS3P49746 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS3P49746 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS3P49746 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
THBS3P49746 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
THBS3P49746 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
THBS3P49746 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS3P49746 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.35■□□□□ 0.69
THBS3P49746 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
THBS3P49746 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS3P49746 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms