Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
USP6P35125 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.67■■■□□ 2.82
USP6P35125 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.67■■■□□ 2.82
USP6P35125 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.66■■■□□ 2.82
USP6P35125 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.66■■■□□ 2.82
USP6P35125 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.66■■■□□ 2.82
USP6P35125 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.65■■■□□ 2.82
USP6P35125 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
USP6P35125 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
USP6P35125 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.64■■■□□ 2.82
USP6P35125 AC131281.2-201ENST00000520478 145 ntBASIC32.64■■■□□ 2.82
USP6P35125 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC32.64■■■□□ 2.82
USP6P35125 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
USP6P35125 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC32.64■■■□□ 2.82
USP6P35125 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
USP6P35125 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC32.63■■■□□ 2.81
USP6P35125 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
USP6P35125 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC32.63■■■□□ 2.81
USP6P35125 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
USP6P35125 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC32.62■■■□□ 2.81
USP6P35125 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.62■■■□□ 2.81
USP6P35125 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.61■■■□□ 2.81
USP6P35125 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
USP6P35125 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
USP6P35125 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
USP6P35125 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.6■■■□□ 2.81
USP6P35125 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.59■■■□□ 2.81
USP6P35125 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
USP6P35125 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
USP6P35125 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
USP6P35125 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC32.58■■■□□ 2.81
USP6P35125 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.58■■■□□ 2.81
USP6P35125 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
USP6P35125 GAK-223ENST00000628912 497 ntTSL 5 BASIC32.58■■■□□ 2.81
USP6P35125 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.81
USP6P35125 TRIR-202ENST00000588213 841 ntTSL 3 BASIC32.57■■■□□ 2.8
USP6P35125 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.57■■■□□ 2.8
USP6P35125 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
USP6P35125 AL117332.1-201ENST00000622628 974 ntBASIC32.56■■■□□ 2.8
USP6P35125 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.56■■■□□ 2.8
USP6P35125 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
USP6P35125 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
USP6P35125 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
USP6P35125 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
USP6P35125 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
USP6P35125 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.55■■■□□ 2.8
USP6P35125 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.55■■■□□ 2.8
USP6P35125 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC32.55■■■□□ 2.8
USP6P35125 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
USP6P35125 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
USP6P35125 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
USP6P35125 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
USP6P35125 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
USP6P35125 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
USP6P35125 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.54■■■□□ 2.8
USP6P35125 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC32.53■■■□□ 2.8
USP6P35125 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
USP6P35125 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC32.52■■■□□ 2.8
USP6P35125 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.52■■■□□ 2.8
USP6P35125 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
USP6P35125 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC32.52■■■□□ 2.8
USP6P35125 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC32.51■■■□□ 2.8
USP6P35125 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.8
USP6P35125 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
USP6P35125 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.51■■■□□ 2.8
USP6P35125 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
USP6P35125 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
USP6P35125 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
USP6P35125 RPP21-222ENST00000433076 577 ntTSL 2 BASIC32.51■■■□□ 2.79
USP6P35125 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
USP6P35125 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
USP6P35125 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
USP6P35125 MIR638-201ENST00000385237 100 ntBASIC32.5■■■□□ 2.79
USP6P35125 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC32.5■■■□□ 2.79
USP6P35125 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC32.5■■■□□ 2.79
USP6P35125 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
USP6P35125 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
USP6P35125 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
USP6P35125 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.49■■■□□ 2.79
USP6P35125 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC32.49■■■□□ 2.79
USP6P35125 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
USP6P35125 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.49■■■□□ 2.79
USP6P35125 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC32.49■■■□□ 2.79
USP6P35125 AC010997.5-201ENST00000609182 354 ntBASIC32.49■■■□□ 2.79
USP6P35125 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC32.49■■■□□ 2.79
USP6P35125 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
USP6P35125 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
USP6P35125 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC32.48■■■□□ 2.79
USP6P35125 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC32.48■■■□□ 2.79
USP6P35125 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
USP6P35125 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
USP6P35125 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
USP6P35125 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.48■■■□□ 2.79
USP6P35125 AF131216.4-201ENST00000638924 1588 ntBASIC32.48■■■□□ 2.79
USP6P35125 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
USP6P35125 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.48■■■□□ 2.79
USP6P35125 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
USP6P35125 SRR-208ENST00000576848 588 ntTSL 4 BASIC32.47■■■□□ 2.79
USP6P35125 MTDHP2-201ENST00000601468 714 ntBASIC32.47■■■□□ 2.79
USP6P35125 MIR3621-201ENST00000580529 85 ntBASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms