Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDLIM1O00151 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDLIM1O00151 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDLIM1O00151 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM1O00151 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PDLIM1O00151 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.42■■□□□ 1.18
PDLIM1O00151 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM1O00151 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.42■■□□□ 1.18
PDLIM1O00151 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PDLIM1O00151 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.41■■□□□ 1.18
PDLIM1O00151 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
PDLIM1O00151 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM1O00151 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PDLIM1O00151 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM1O00151 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM1O00151 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.4■■□□□ 1.18
PDLIM1O00151 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM1O00151 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM1O00151 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM1O00151 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM1O00151 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.39■■□□□ 1.18
PDLIM1O00151 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDLIM1O00151 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDLIM1O00151 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDLIM1O00151 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM1O00151 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM1O00151 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM1O00151 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PDLIM1O00151 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.38■■□□□ 1.17
PDLIM1O00151 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PDLIM1O00151 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PDLIM1O00151 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM1O00151 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDLIM1O00151 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.37■■□□□ 1.17
PDLIM1O00151 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDLIM1O00151 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.37■■□□□ 1.17
PDLIM1O00151 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PDLIM1O00151 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.36■■□□□ 1.17
PDLIM1O00151 MIR4449-201ENST00000578365 66 ntBASIC22.36■■□□□ 1.17
PDLIM1O00151 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.36■■□□□ 1.17
PDLIM1O00151 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.36■■□□□ 1.17
PDLIM1O00151 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM1O00151 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.36■■□□□ 1.17
PDLIM1O00151 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM1O00151 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM1O00151 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM1O00151 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM1O00151 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.35■■□□□ 1.17
PDLIM1O00151 AC097639.1-201ENST00000565519 1891 ntBASIC22.34■■□□□ 1.17
PDLIM1O00151 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM1O00151 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM1O00151 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.34■■□□□ 1.17
PDLIM1O00151 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.34■■□□□ 1.17
PDLIM1O00151 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM1O00151 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PDLIM1O00151 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.33■■□□□ 1.17
PDLIM1O00151 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM1O00151 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.33■■□□□ 1.16
PDLIM1O00151 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDLIM1O00151 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDLIM1O00151 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDLIM1O00151 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM1O00151 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.32■■□□□ 1.16
PDLIM1O00151 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PDLIM1O00151 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM1O00151 AC008813.1-201ENST00000536597 885 ntBASIC22.32■■□□□ 1.16
PDLIM1O00151 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM1O00151 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM1O00151 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM1O00151 AL121603.2-201ENST00000557373 2117 ntBASIC22.31■■□□□ 1.16
PDLIM1O00151 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PDLIM1O00151 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM1O00151 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM1O00151 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM1O00151 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM1O00151 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM1O00151 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM1O00151 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms