Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 MTDHP2-201ENST00000601468 714 ntBASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRGV8A0A0C4DH27 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.29■■□□□ 1
TRGV8A0A0C4DH27 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.29■■□□□ 1
TRGV8A0A0C4DH27 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRGV8A0A0C4DH27 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV8A0A0C4DH27 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRGV8A0A0C4DH27 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV8A0A0C4DH27 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRGV8A0A0C4DH27 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV8A0A0C4DH27 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRGV8A0A0C4DH27 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.28■■□□□ 1
TRGV8A0A0C4DH27 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRGV8A0A0C4DH27 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRGV8A0A0C4DH27 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.27■■□□□ 1
TRGV8A0A0C4DH27 AL117332.1-201ENST00000622628 974 ntBASIC21.27■■□□□ 1
TRGV8A0A0C4DH27 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRGV8A0A0C4DH27 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV8A0A0C4DH27 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.26■□□□□ 0.99
TRGV8A0A0C4DH27 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TRGV8A0A0C4DH27 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.26■□□□□ 0.99
TRGV8A0A0C4DH27 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV8A0A0C4DH27 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV8A0A0C4DH27 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 AP004609.3-201ENST00000610705 1884 ntBASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 MIR6724-1-201ENST00000616420 92 ntBASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 MIR6724-2-201ENST00000616483 92 ntBASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 MIR6724-4-201ENST00000617390 92 ntBASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 MIR6724-3-201ENST00000622482 92 ntBASIC21.25■□□□□ 0.99
TRGV8A0A0C4DH27 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 AL356740.2-201ENST00000601559 647 ntBASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRGV8A0A0C4DH27 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV8A0A0C4DH27 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRGV8A0A0C4DH27 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV8A0A0C4DH27 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.22■□□□□ 0.99
TRGV8A0A0C4DH27 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRGV8A0A0C4DH27 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.22■□□□□ 0.99
TRGV8A0A0C4DH27 MIR3621-201ENST00000580529 85 ntBASIC21.22■□□□□ 0.99
TRGV8A0A0C4DH27 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.22■□□□□ 0.99
TRGV8A0A0C4DH27 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRGV8A0A0C4DH27 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRGV8A0A0C4DH27 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.21■□□□□ 0.99
TRGV8A0A0C4DH27 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRGV8A0A0C4DH27 AC011551.1-201ENST00000614101 683 ntBASIC21.21■□□□□ 0.99
TRGV8A0A0C4DH27 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRGV8A0A0C4DH27 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.2■□□□□ 0.98
TRGV8A0A0C4DH27 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRGV8A0A0C4DH27 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.18■□□□□ 0.98
TRGV8A0A0C4DH27 AC096631.2-201ENST00000436136 790 ntBASIC21.18■□□□□ 0.98
TRGV8A0A0C4DH27 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.18■□□□□ 0.98
TRGV8A0A0C4DH27 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.18■□□□□ 0.98
TRGV8A0A0C4DH27 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRGV8A0A0C4DH27 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRGV8A0A0C4DH27 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms