Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV13-1A0A0B4J241 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV13-1A0A0B4J241 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 DUX4L11-201ENST00000611504 1267 ntBASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 DUX4L12-201ENST00000614593 1267 ntBASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 DUX4L14-201ENST00000621227 1267 ntBASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV13-1A0A0B4J241 LINC01124-201ENST00000409786 2117 ntBASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.37■□□□□ 0.21
TRAV13-1A0A0B4J241 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-1A0A0B4J241 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 HLA-V-202ENST00000446817 847 ntBASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-1A0A0B4J241 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 AC097639.1-201ENST00000565519 1891 ntBASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 AP003733.4-201ENST00000623785 1697 ntBASIC16.34■□□□□ 0.21
TRAV13-1A0A0B4J241 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRAV13-1A0A0B4J241 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TRAV13-1A0A0B4J241 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms