Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ST7-AS1-201ENST00000456775 1889 ntBASIC29.4■■■□□ 2.3
ZC3H4Q9UPT8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H4Q9UPT8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
ZC3H4Q9UPT8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H4Q9UPT8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.39■■■□□ 2.3
ZC3H4Q9UPT8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ZC3H4Q9UPT8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.38■■■□□ 2.29
ZC3H4Q9UPT8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ZC3H4Q9UPT8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
ZC3H4Q9UPT8 PBX2P1-201ENST00000493219 1291 ntBASIC29.38■■■□□ 2.29
ZC3H4Q9UPT8 SUDS3P1-201ENST00000505831 966 ntBASIC29.38■■■□□ 2.29
ZC3H4Q9UPT8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.38■■■□□ 2.29
ZC3H4Q9UPT8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 AL031432.3-201ENST00000607698 485 ntBASIC29.37■■■□□ 2.29
ZC3H4Q9UPT8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
ZC3H4Q9UPT8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZC3H4Q9UPT8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
ZC3H4Q9UPT8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H4Q9UPT8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H4Q9UPT8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.35■■■□□ 2.29
ZC3H4Q9UPT8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H4Q9UPT8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ZC3H4Q9UPT8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
ZC3H4Q9UPT8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
ZC3H4Q9UPT8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H4Q9UPT8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.32■■■□□ 2.28
ZC3H4Q9UPT8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H4Q9UPT8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H4Q9UPT8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.32■■■□□ 2.28
ZC3H4Q9UPT8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H4Q9UPT8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H4Q9UPT8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H4Q9UPT8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H4Q9UPT8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H4Q9UPT8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H4Q9UPT8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZC3H4Q9UPT8 ABCB10P3-201ENST00000561950 2166 ntBASIC29.29■■■□□ 2.28
ZC3H4Q9UPT8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.29■■■□□ 2.28
ZC3H4Q9UPT8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.29■■■□□ 2.28
ZC3H4Q9UPT8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.29■■■□□ 2.28
ZC3H4Q9UPT8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
ZC3H4Q9UPT8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ZC3H4Q9UPT8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ZC3H4Q9UPT8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.28■■■□□ 2.28
ZC3H4Q9UPT8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.28■■■□□ 2.28
ZC3H4Q9UPT8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.28■■■□□ 2.28
ZC3H4Q9UPT8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
ZC3H4Q9UPT8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.27■■■□□ 2.28
ZC3H4Q9UPT8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.27■■■□□ 2.28
ZC3H4Q9UPT8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.27■■■□□ 2.28
ZC3H4Q9UPT8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC29.27■■■□□ 2.28
ZC3H4Q9UPT8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ZC3H4Q9UPT8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
ZC3H4Q9UPT8 EDA-201ENST00000338901 1233 ntBASIC29.26■■■□□ 2.27
ZC3H4Q9UPT8 AC011551.1-201ENST00000614101 683 ntBASIC29.26■■■□□ 2.27
ZC3H4Q9UPT8 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.26■■■□□ 2.27
ZC3H4Q9UPT8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
ZC3H4Q9UPT8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.25■■■□□ 2.27
ZC3H4Q9UPT8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.24■■■□□ 2.27
ZC3H4Q9UPT8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.24■■■□□ 2.27
ZC3H4Q9UPT8 MIR6821-201ENST00000617625 74 ntBASIC29.24■■■□□ 2.27
ZC3H4Q9UPT8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
ZC3H4Q9UPT8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ZC3H4Q9UPT8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
ZC3H4Q9UPT8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
ZC3H4Q9UPT8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
ZC3H4Q9UPT8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ZC3H4Q9UPT8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ZC3H4Q9UPT8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms