Protein–RNA interactions for Protein: Q9NQX0

PRDM6, Putative histone-lysine N-methyltransferase PRDM6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6Q9NQX0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.4■■□□□ 1.66
PRDM6Q9NQX0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.4■■□□□ 1.66
PRDM6Q9NQX0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PRDM6Q9NQX0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PRDM6Q9NQX0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PRDM6Q9NQX0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.39■■□□□ 1.66
PRDM6Q9NQX0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PRDM6Q9NQX0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PRDM6Q9NQX0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PRDM6Q9NQX0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.38■■□□□ 1.65
PRDM6Q9NQX0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PRDM6Q9NQX0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.38■■□□□ 1.65
PRDM6Q9NQX0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.38■■□□□ 1.65
PRDM6Q9NQX0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PRDM6Q9NQX0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PRDM6Q9NQX0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.37■■□□□ 1.65
PRDM6Q9NQX0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.37■■□□□ 1.65
PRDM6Q9NQX0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PRDM6Q9NQX0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.37■■□□□ 1.65
PRDM6Q9NQX0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.37■■□□□ 1.65
PRDM6Q9NQX0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
PRDM6Q9NQX0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
PRDM6Q9NQX0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PRDM6Q9NQX0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PRDM6Q9NQX0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PRDM6Q9NQX0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.35■■□□□ 1.65
PRDM6Q9NQX0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
PRDM6Q9NQX0 AC024257.2-201ENST00000549699 147 ntBASIC25.35■■□□□ 1.65
PRDM6Q9NQX0 AL355001.2-201ENST00000620617 1191 ntBASIC25.35■■□□□ 1.65
PRDM6Q9NQX0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
PRDM6Q9NQX0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
PRDM6Q9NQX0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PRDM6Q9NQX0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PRDM6Q9NQX0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PRDM6Q9NQX0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PRDM6Q9NQX0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PRDM6Q9NQX0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRDM6Q9NQX0 EDA-201ENST00000338901 1233 ntBASIC25.33■■□□□ 1.65
PRDM6Q9NQX0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PRDM6Q9NQX0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRDM6Q9NQX0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.33■■□□□ 1.65
PRDM6Q9NQX0 AL136967.2-201ENST00000623968 743 ntBASIC25.33■■□□□ 1.65
PRDM6Q9NQX0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PRDM6Q9NQX0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
PRDM6Q9NQX0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PRDM6Q9NQX0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PRDM6Q9NQX0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PRDM6Q9NQX0 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.32■■□□□ 1.64
PRDM6Q9NQX0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PRDM6Q9NQX0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PRDM6Q9NQX0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PRDM6Q9NQX0 AF213884.3-201ENST00000563833 479 ntBASIC25.31■■□□□ 1.64
PRDM6Q9NQX0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PRDM6Q9NQX0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PRDM6Q9NQX0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PRDM6Q9NQX0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRDM6Q9NQX0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PRDM6Q9NQX0 ID1-201ENST00000376105 1233 ntBASIC25.28■■□□□ 1.64
PRDM6Q9NQX0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.28■■□□□ 1.64
PRDM6Q9NQX0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 IKBKGP1-201ENST00000612193 1073 ntBASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PRDM6Q9NQX0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PRDM6Q9NQX0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.25■■□□□ 1.63
PRDM6Q9NQX0 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.25■■□□□ 1.63
PRDM6Q9NQX0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.25■■□□□ 1.63
PRDM6Q9NQX0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PRDM6Q9NQX0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRDM6Q9NQX0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PRDM6Q9NQX0 AP002414.2-202ENST00000590929 1450 ntBASIC25.24■■□□□ 1.63
PRDM6Q9NQX0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PRDM6Q9NQX0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRDM6Q9NQX0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRDM6Q9NQX0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRDM6Q9NQX0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
PRDM6Q9NQX0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PRDM6Q9NQX0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRDM6Q9NQX0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms