Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CYSTM1Q9H1C7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CYSTM1Q9H1C7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.18□□□□□ -0.14
CYSTM1Q9H1C7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CYSTM1Q9H1C7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CYSTM1Q9H1C7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CYSTM1Q9H1C7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CYSTM1Q9H1C7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 DUSP8P3-201ENST00000399571 1760 ntBASIC14.17□□□□□ -0.14
CYSTM1Q9H1C7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CYSTM1Q9H1C7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.15□□□□□ -0.14
CYSTM1Q9H1C7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYSTM1Q9H1C7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYSTM1Q9H1C7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CYSTM1Q9H1C7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC14.15□□□□□ -0.14
CYSTM1Q9H1C7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CYSTM1Q9H1C7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CYSTM1Q9H1C7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC14.14□□□□□ -0.15
CYSTM1Q9H1C7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.13□□□□□ -0.15
CYSTM1Q9H1C7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 AC022211.4-201ENST00000625094 2161 ntBASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 AC233723.2-201ENST00000623798 2106 ntBASIC14.12□□□□□ -0.15
CYSTM1Q9H1C7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CYSTM1Q9H1C7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CYSTM1Q9H1C7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CYSTM1Q9H1C7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CYSTM1Q9H1C7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CYSTM1Q9H1C7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.1□□□□□ -0.15
CYSTM1Q9H1C7 AC007952.6-201ENST00000573168 2673 ntBASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 AC003957.1-201ENST00000625108 2673 ntBASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.09□□□□□ -0.15
CYSTM1Q9H1C7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms