Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.51■■□□□ 1.03
HPS1Q92902 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HPS1Q92902 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HPS1Q92902 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HPS1Q92902 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.5■■□□□ 1.03
HPS1Q92902 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HPS1Q92902 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HPS1Q92902 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HPS1Q92902 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HPS1Q92902 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.49■■□□□ 1.03
HPS1Q92902 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HPS1Q92902 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HPS1Q92902 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HPS1Q92902 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.49■■□□□ 1.03
HPS1Q92902 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HPS1Q92902 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.48■■□□□ 1.03
HPS1Q92902 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.48■■□□□ 1.03
HPS1Q92902 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.48■■□□□ 1.03
HPS1Q92902 AC008813.1-201ENST00000536597 885 ntBASIC21.48■■□□□ 1.03
HPS1Q92902 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.48■■□□□ 1.03
HPS1Q92902 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS1Q92902 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS1Q92902 AC100797.4-201ENST00000631653 1827 ntBASIC21.48■■□□□ 1.03
HPS1Q92902 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.48■■□□□ 1.03
HPS1Q92902 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HPS1Q92902 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HPS1Q92902 AC110285.7-201ENST00000624417 1536 ntBASIC21.47■■□□□ 1.03
HPS1Q92902 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
HPS1Q92902 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.46■■□□□ 1.03
HPS1Q92902 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.46■■□□□ 1.03
HPS1Q92902 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS1Q92902 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS1Q92902 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS1Q92902 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS1Q92902 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
HPS1Q92902 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.46■■□□□ 1.03
HPS1Q92902 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
HPS1Q92902 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
HPS1Q92902 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HPS1Q92902 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HPS1Q92902 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.45■■□□□ 1.02
HPS1Q92902 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HPS1Q92902 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HPS1Q92902 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HPS1Q92902 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HPS1Q92902 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HPS1Q92902 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HPS1Q92902 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HPS1Q92902 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.44■■□□□ 1.02
HPS1Q92902 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HPS1Q92902 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HPS1Q92902 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HPS1Q92902 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HPS1Q92902 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.43■■□□□ 1.02
HPS1Q92902 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.43■■□□□ 1.02
HPS1Q92902 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HPS1Q92902 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HPS1Q92902 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HPS1Q92902 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HPS1Q92902 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HPS1Q92902 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HPS1Q92902 RARRES2P2-201ENST00000394842 485 ntBASIC21.42■■□□□ 1.02
HPS1Q92902 GPX1-201ENST00000419349 1106 ntBASIC21.42■■□□□ 1.02
HPS1Q92902 AL139125.2-201ENST00000623134 1869 ntBASIC21.41■■□□□ 1.02
HPS1Q92902 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
HPS1Q92902 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HPS1Q92902 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HPS1Q92902 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.41■■□□□ 1.02
HPS1Q92902 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HPS1Q92902 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HPS1Q92902 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HPS1Q92902 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HPS1Q92902 RNF126P1-201ENST00000567452 1320 ntBASIC21.4■■□□□ 1.02
HPS1Q92902 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HPS1Q92902 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HPS1Q92902 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HPS1Q92902 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HPS1Q92902 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HPS1Q92902 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HPS1Q92902 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HPS1Q92902 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HPS1Q92902 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.38■■□□□ 1.01
HPS1Q92902 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS1Q92902 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS1Q92902 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS1Q92902 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS1Q92902 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HPS1Q92902 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS1Q92902 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.38■■□□□ 1.01
HPS1Q92902 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.38■■□□□ 1.01
HPS1Q92902 AP002414.2-202ENST00000590929 1450 ntBASIC21.38■■□□□ 1.01
HPS1Q92902 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HPS1Q92902 AL024507.2-201ENST00000606070 2574 ntBASIC21.38■■□□□ 1.01
HPS1Q92902 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS1Q92902 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS1Q92902 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS1Q92902 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.37■■□□□ 1.01
HPS1Q92902 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS1Q92902 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS1Q92902 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms