Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3S1Q92572 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.97■□□□□ 0.95
AP3S1Q92572 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3S1Q92572 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.96■□□□□ 0.95
AP3S1Q92572 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3S1Q92572 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
AP3S1Q92572 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3S1Q92572 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S1Q92572 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S1Q92572 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S1Q92572 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S1Q92572 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
AP3S1Q92572 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3S1Q92572 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3S1Q92572 CLDN5-201ENST00000403084 2357 ntBASIC20.95■□□□□ 0.94
AP3S1Q92572 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3S1Q92572 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S1Q92572 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.95■□□□□ 0.94
AP3S1Q92572 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
AP3S1Q92572 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S1Q92572 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S1Q92572 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S1Q92572 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.94■□□□□ 0.94
AP3S1Q92572 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3S1Q92572 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S1Q92572 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3S1Q92572 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S1Q92572 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3S1Q92572 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3S1Q92572 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3S1Q92572 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3S1Q92572 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
AP3S1Q92572 AC110285.7-201ENST00000624417 1536 ntBASIC20.93■□□□□ 0.94
AP3S1Q92572 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP3S1Q92572 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
AP3S1Q92572 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
AP3S1Q92572 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.92■□□□□ 0.94
AP3S1Q92572 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S1Q92572 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
AP3S1Q92572 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3S1Q92572 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP3S1Q92572 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.91■□□□□ 0.94
AP3S1Q92572 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3S1Q92572 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S1Q92572 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S1Q92572 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S1Q92572 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S1Q92572 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S1Q92572 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
AP3S1Q92572 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.9■□□□□ 0.94
AP3S1Q92572 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3S1Q92572 MIR762-201ENST00000390236 83 ntBASIC20.9■□□□□ 0.94
AP3S1Q92572 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3S1Q92572 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3S1Q92572 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
AP3S1Q92572 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S1Q92572 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
AP3S1Q92572 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
AP3S1Q92572 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP3S1Q92572 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3S1Q92572 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.89■□□□□ 0.93
AP3S1Q92572 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S1Q92572 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S1Q92572 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S1Q92572 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.88■□□□□ 0.93
AP3S1Q92572 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
AP3S1Q92572 CAHM-201ENST00000604200 896 ntBASIC20.88■□□□□ 0.93
AP3S1Q92572 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S1Q92572 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.88■□□□□ 0.93
AP3S1Q92572 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S1Q92572 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S1Q92572 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S1Q92572 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
AP3S1Q92572 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
AP3S1Q92572 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
AP3S1Q92572 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S1Q92572 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S1Q92572 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S1Q92572 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S1Q92572 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
AP3S1Q92572 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S1Q92572 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S1Q92572 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 267.7 ms