Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC37.78■■■■□ 3.64
CASKIN1Q8WXD9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
CASKIN1Q8WXD9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
CASKIN1Q8WXD9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CASKIN1Q8WXD9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CASKIN1Q8WXD9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC37.77■■■■□ 3.64
CASKIN1Q8WXD9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
CASKIN1Q8WXD9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC37.77■■■■□ 3.64
CASKIN1Q8WXD9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC37.76■■■■□ 3.64
CASKIN1Q8WXD9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC37.76■■■■□ 3.63
CASKIN1Q8WXD9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC37.75■■■■□ 3.63
CASKIN1Q8WXD9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
CASKIN1Q8WXD9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC37.75■■■■□ 3.63
CASKIN1Q8WXD9 AC131212.1-201ENST00000613771 668 ntBASIC37.75■■■■□ 3.63
CASKIN1Q8WXD9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
CASKIN1Q8WXD9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC37.74■■■■□ 3.63
CASKIN1Q8WXD9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC37.74■■■■□ 3.63
CASKIN1Q8WXD9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC37.74■■■■□ 3.63
CASKIN1Q8WXD9 AL592295.1-201ENST00000400984 884 ntBASIC37.74■■■■□ 3.63
CASKIN1Q8WXD9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC37.74■■■■□ 3.63
CASKIN1Q8WXD9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC37.74■■■■□ 3.63
CASKIN1Q8WXD9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
CASKIN1Q8WXD9 AC120024.1-201ENST00000562672 995 ntBASIC37.73■■■■□ 3.63
CASKIN1Q8WXD9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC37.73■■■■□ 3.63
CASKIN1Q8WXD9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC37.72■■■■□ 3.63
CASKIN1Q8WXD9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC37.72■■■■□ 3.63
CASKIN1Q8WXD9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC37.71■■■■□ 3.63
CASKIN1Q8WXD9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
CASKIN1Q8WXD9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC37.7■■■■□ 3.63
CASKIN1Q8WXD9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC37.7■■■■□ 3.63
CASKIN1Q8WXD9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.62
CASKIN1Q8WXD9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC37.7■■■■□ 3.62
CASKIN1Q8WXD9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC37.7■■■■□ 3.62
CASKIN1Q8WXD9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CASKIN1Q8WXD9 AC137630.3-201ENST00000607245 391 ntBASIC37.69■■■■□ 3.62
CASKIN1Q8WXD9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC37.69■■■■□ 3.62
CASKIN1Q8WXD9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CASKIN1Q8WXD9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
CASKIN1Q8WXD9 BX664725.1-201ENST00000438252 379 ntBASIC37.68■■■■□ 3.62
CASKIN1Q8WXD9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC37.68■■■■□ 3.62
CASKIN1Q8WXD9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC37.68■■■■□ 3.62
CASKIN1Q8WXD9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC37.68■■■■□ 3.62
CASKIN1Q8WXD9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CASKIN1Q8WXD9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
CASKIN1Q8WXD9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CASKIN1Q8WXD9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CASKIN1Q8WXD9 MIR4281-201ENST00000580852 62 ntBASIC37.66■■■■□ 3.62
CASKIN1Q8WXD9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC37.66■■■■□ 3.62
CASKIN1Q8WXD9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC37.66■■■■□ 3.62
CASKIN1Q8WXD9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC37.65■■■■□ 3.62
CASKIN1Q8WXD9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC37.65■■■■□ 3.62
CASKIN1Q8WXD9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC37.65■■■■□ 3.62
CASKIN1Q8WXD9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC37.64■■■■□ 3.62
CASKIN1Q8WXD9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
CASKIN1Q8WXD9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC37.64■■■■□ 3.62
CASKIN1Q8WXD9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC37.64■■■■□ 3.62
CASKIN1Q8WXD9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
CASKIN1Q8WXD9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC37.64■■■■□ 3.62
CASKIN1Q8WXD9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.62
CASKIN1Q8WXD9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC37.63■■■■□ 3.62
CASKIN1Q8WXD9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.62
CASKIN1Q8WXD9 UNC93B8-201ENST00000511903 705 ntBASIC37.63■■■■□ 3.61
CASKIN1Q8WXD9 MIR4787-201ENST00000607364 84 ntBASIC37.63■■■■□ 3.61
CASKIN1Q8WXD9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC37.63■■■■□ 3.61
CASKIN1Q8WXD9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC37.63■■■■□ 3.61
CASKIN1Q8WXD9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
CASKIN1Q8WXD9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC37.63■■■■□ 3.61
CASKIN1Q8WXD9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 AC021242.3-201ENST00000607598 1377 ntBASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC37.62■■■■□ 3.61
CASKIN1Q8WXD9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
CASKIN1Q8WXD9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
CASKIN1Q8WXD9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC37.61■■■■□ 3.61
CASKIN1Q8WXD9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC37.6■■■■□ 3.61
CASKIN1Q8WXD9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
CASKIN1Q8WXD9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC37.6■■■■□ 3.61
CASKIN1Q8WXD9 KRT125P-201ENST00000546827 989 ntBASIC37.6■■■■□ 3.61
CASKIN1Q8WXD9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC37.6■■■■□ 3.61
CASKIN1Q8WXD9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC37.6■■■■□ 3.61
CASKIN1Q8WXD9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC37.59■■■■□ 3.61
CASKIN1Q8WXD9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC37.59■■■■□ 3.61
CASKIN1Q8WXD9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
CASKIN1Q8WXD9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC37.58■■■■□ 3.61
CASKIN1Q8WXD9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC37.58■■■■□ 3.61
CASKIN1Q8WXD9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC37.58■■■■□ 3.61
CASKIN1Q8WXD9 AC011551.1-201ENST00000614101 683 ntBASIC37.58■■■■□ 3.61
CASKIN1Q8WXD9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
CASKIN1Q8WXD9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC37.57■■■■□ 3.6
CASKIN1Q8WXD9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
CASKIN1Q8WXD9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
CASKIN1Q8WXD9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC37.57■■■■□ 3.6
CASKIN1Q8WXD9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
CASKIN1Q8WXD9 GRAMD4P7-201ENST00000578182 1232 ntBASIC37.56■■■■□ 3.6
CASKIN1Q8WXD9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms