Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
CPSF7Q8N684 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CPSF7Q8N684 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPSF7Q8N684 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CPSF7Q8N684 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPSF7Q8N684 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPSF7Q8N684 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.26■■□□□ 1.31
CPSF7Q8N684 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPSF7Q8N684 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.26■■□□□ 1.31
CPSF7Q8N684 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.26■■□□□ 1.31
CPSF7Q8N684 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPSF7Q8N684 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPSF7Q8N684 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPSF7Q8N684 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.25■■□□□ 1.31
CPSF7Q8N684 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.25■■□□□ 1.31
CPSF7Q8N684 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CPSF7Q8N684 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPSF7Q8N684 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPSF7Q8N684 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPSF7Q8N684 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPSF7Q8N684 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPSF7Q8N684 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPSF7Q8N684 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.24■■□□□ 1.31
CPSF7Q8N684 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CPSF7Q8N684 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.24■■□□□ 1.31
CPSF7Q8N684 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPSF7Q8N684 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPSF7Q8N684 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CPSF7Q8N684 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPSF7Q8N684 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPSF7Q8N684 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CPSF7Q8N684 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CPSF7Q8N684 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPSF7Q8N684 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.23■■□□□ 1.31
CPSF7Q8N684 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPSF7Q8N684 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPSF7Q8N684 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPSF7Q8N684 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPSF7Q8N684 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPSF7Q8N684 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.22■■□□□ 1.31
CPSF7Q8N684 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.21■■□□□ 1.31
CPSF7Q8N684 RARRES2P2-201ENST00000394842 485 ntBASIC23.21■■□□□ 1.31
CPSF7Q8N684 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CPSF7Q8N684 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPSF7Q8N684 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPSF7Q8N684 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPSF7Q8N684 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.21■■□□□ 1.31
CPSF7Q8N684 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF7Q8N684 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF7Q8N684 AP003733.4-201ENST00000623785 1697 ntBASIC23.2■■□□□ 1.3
CPSF7Q8N684 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CPSF7Q8N684 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF7Q8N684 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF7Q8N684 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF7Q8N684 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.2■■□□□ 1.3
CPSF7Q8N684 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF7Q8N684 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.19■■□□□ 1.3
CPSF7Q8N684 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.19■■□□□ 1.3
CPSF7Q8N684 AC022413.1-201ENST00000624602 984 ntBASIC23.19■■□□□ 1.3
CPSF7Q8N684 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CPSF7Q8N684 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF7Q8N684 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF7Q8N684 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF7Q8N684 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
CPSF7Q8N684 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF7Q8N684 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF7Q8N684 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF7Q8N684 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF7Q8N684 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.18■■□□□ 1.3
CPSF7Q8N684 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF7Q8N684 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF7Q8N684 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF7Q8N684 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPSF7Q8N684 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPSF7Q8N684 LINC01124-201ENST00000409786 2117 ntBASIC23.17■■□□□ 1.3
CPSF7Q8N684 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPSF7Q8N684 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CPSF7Q8N684 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.16■■□□□ 1.3
CPSF7Q8N684 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.16■■□□□ 1.3
CPSF7Q8N684 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.16■■□□□ 1.3
CPSF7Q8N684 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.16■■□□□ 1.3
CPSF7Q8N684 AC148477.6-201ENST00000623746 465 ntBASIC23.16■■□□□ 1.3
CPSF7Q8N684 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF7Q8N684 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF7Q8N684 RNF126P1-201ENST00000567452 1320 ntBASIC23.15■■□□□ 1.3
CPSF7Q8N684 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF7Q8N684 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CPSF7Q8N684 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF7Q8N684 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CPSF7Q8N684 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CPSF7Q8N684 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CPSF7Q8N684 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPSF7Q8N684 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms