Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00471Q8N535 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00471Q8N535 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00471Q8N535 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
LINC00471Q8N535 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LINC00471Q8N535 SLC6A10P-202ENST00000431994 2058 ntBASIC21.78■■□□□ 1.08
LINC00471Q8N535 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LINC00471Q8N535 LINC01124-201ENST00000409786 2117 ntBASIC21.78■■□□□ 1.08
LINC00471Q8N535 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.78■■□□□ 1.08
LINC00471Q8N535 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00471Q8N535 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00471Q8N535 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00471Q8N535 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00471Q8N535 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00471Q8N535 AC141586.4-201ENST00000624558 1573 ntBASIC21.78■■□□□ 1.08
LINC00471Q8N535 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00471Q8N535 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.77■■□□□ 1.08
LINC00471Q8N535 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00471Q8N535 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.77■■□□□ 1.08
LINC00471Q8N535 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00471Q8N535 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC00471Q8N535 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00471Q8N535 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00471Q8N535 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LINC00471Q8N535 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00471Q8N535 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00471Q8N535 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00471Q8N535 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00471Q8N535 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00471Q8N535 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00471Q8N535 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00471Q8N535 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LINC00471Q8N535 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00471Q8N535 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00471Q8N535 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.75■■□□□ 1.07
LINC00471Q8N535 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.75■■□□□ 1.07
LINC00471Q8N535 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00471Q8N535 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00471Q8N535 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00471Q8N535 LINC00543-201ENST00000567234 1845 ntBASIC21.74■■□□□ 1.07
LINC00471Q8N535 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00471Q8N535 ZNRF2P2-203ENST00000454624 420 ntBASIC21.74■■□□□ 1.07
LINC00471Q8N535 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00471Q8N535 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00471Q8N535 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00471Q8N535 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00471Q8N535 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LINC00471Q8N535 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00471Q8N535 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.73■■□□□ 1.07
LINC00471Q8N535 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00471Q8N535 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.73■■□□□ 1.07
LINC00471Q8N535 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00471Q8N535 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00471Q8N535 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00471Q8N535 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC00471Q8N535 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00471Q8N535 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00471Q8N535 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00471Q8N535 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.71■■□□□ 1.07
LINC00471Q8N535 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LINC00471Q8N535 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00471Q8N535 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00471Q8N535 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00471Q8N535 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LINC00471Q8N535 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LINC00471Q8N535 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.7■■□□□ 1.06
LINC00471Q8N535 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
LINC00471Q8N535 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00471Q8N535 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00471Q8N535 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00471Q8N535 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LINC00471Q8N535 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00471Q8N535 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LINC00471Q8N535 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00471Q8N535 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00471Q8N535 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.69■■□□□ 1.06
LINC00471Q8N535 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00471Q8N535 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.69■■□□□ 1.06
LINC00471Q8N535 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00471Q8N535 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LINC00471Q8N535 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00471Q8N535 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00471Q8N535 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00471Q8N535 CR559946.2-201ENST00000623684 991 ntBASIC21.68■■□□□ 1.06
LINC00471Q8N535 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.68■■□□□ 1.06
LINC00471Q8N535 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00471Q8N535 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
LINC00471Q8N535 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00471Q8N535 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00471Q8N535 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00471Q8N535 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00471Q8N535 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.67■■□□□ 1.06
LINC00471Q8N535 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00471Q8N535 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LINC00471Q8N535 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00471Q8N535 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00471Q8N535 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00471Q8N535 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00471Q8N535 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00471Q8N535 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms