Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR6724-3-201ENST00000622482 92 ntBASIC24.63■■□□□ 1.53
SIX5Q8N196 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SIX5Q8N196 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.62■■□□□ 1.53
SIX5Q8N196 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
SIX5Q8N196 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SIX5Q8N196 MIR4281-201ENST00000580852 62 ntBASIC24.62■■□□□ 1.53
SIX5Q8N196 MTDHP2-201ENST00000601468 714 ntBASIC24.62■■□□□ 1.53
SIX5Q8N196 AL356740.2-201ENST00000601559 647 ntBASIC24.62■■□□□ 1.53
SIX5Q8N196 AC092666.2-201ENST00000613287 246 ntBASIC24.62■■□□□ 1.53
SIX5Q8N196 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SIX5Q8N196 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SIX5Q8N196 MIR4466-201ENST00000606121 54 ntBASIC24.61■■□□□ 1.53
SIX5Q8N196 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SIX5Q8N196 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.61■■□□□ 1.53
SIX5Q8N196 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.61■■□□□ 1.53
SIX5Q8N196 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.6■■□□□ 1.53
SIX5Q8N196 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SIX5Q8N196 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SIX5Q8N196 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.6■■□□□ 1.53
SIX5Q8N196 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SIX5Q8N196 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SIX5Q8N196 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.59■■□□□ 1.53
SIX5Q8N196 AC133561.4-201ENST00000566112 224 ntBASIC24.59■■□□□ 1.53
SIX5Q8N196 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SIX5Q8N196 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SIX5Q8N196 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.59■■□□□ 1.53
SIX5Q8N196 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SIX5Q8N196 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SIX5Q8N196 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SIX5Q8N196 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.58■■□□□ 1.53
SIX5Q8N196 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SIX5Q8N196 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SIX5Q8N196 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SIX5Q8N196 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SIX5Q8N196 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.57■■□□□ 1.52
SIX5Q8N196 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.57■■□□□ 1.52
SIX5Q8N196 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
SIX5Q8N196 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.57■■□□□ 1.52
SIX5Q8N196 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.57■■□□□ 1.52
SIX5Q8N196 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SIX5Q8N196 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SIX5Q8N196 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SIX5Q8N196 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.56■■□□□ 1.52
SIX5Q8N196 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.56■■□□□ 1.52
SIX5Q8N196 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
SIX5Q8N196 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SIX5Q8N196 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SIX5Q8N196 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.55■■□□□ 1.52
SIX5Q8N196 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SIX5Q8N196 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.55■■□□□ 1.52
SIX5Q8N196 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SIX5Q8N196 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.54■■□□□ 1.52
SIX5Q8N196 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SIX5Q8N196 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.54■■□□□ 1.52
SIX5Q8N196 RARRES2P6-201ENST00000567333 442 ntBASIC24.54■■□□□ 1.52
SIX5Q8N196 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SIX5Q8N196 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
SIX5Q8N196 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SIX5Q8N196 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.53■■□□□ 1.52
SIX5Q8N196 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.53■■□□□ 1.52
SIX5Q8N196 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.53■■□□□ 1.52
SIX5Q8N196 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SIX5Q8N196 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SIX5Q8N196 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SIX5Q8N196 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
SIX5Q8N196 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SIX5Q8N196 ZNRF2P3-201ENST00000424200 374 ntBASIC24.52■■□□□ 1.52
SIX5Q8N196 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SIX5Q8N196 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SIX5Q8N196 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SIX5Q8N196 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.51■■□□□ 1.51
SIX5Q8N196 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SIX5Q8N196 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.5■■□□□ 1.51
SIX5Q8N196 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SIX5Q8N196 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
SIX5Q8N196 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SIX5Q8N196 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SIX5Q8N196 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SIX5Q8N196 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.49■■□□□ 1.51
SIX5Q8N196 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.49■■□□□ 1.51
SIX5Q8N196 AL512631.2-201ENST00000604634 923 ntBASIC24.49■■□□□ 1.51
SIX5Q8N196 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
SIX5Q8N196 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SIX5Q8N196 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SIX5Q8N196 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SIX5Q8N196 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SIX5Q8N196 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SIX5Q8N196 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.48■■□□□ 1.51
SIX5Q8N196 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.48■■□□□ 1.51
SIX5Q8N196 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIX5Q8N196 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
SIX5Q8N196 AL449106.1-201ENST00000608517 1980 ntBASIC24.47■■□□□ 1.51
SIX5Q8N196 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIX5Q8N196 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIX5Q8N196 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.47■■□□□ 1.51
SIX5Q8N196 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SIX5Q8N196 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SIX5Q8N196 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.46■■□□□ 1.51
SIX5Q8N196 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SIX5Q8N196 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms