Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 AL157400.5-201ENST00000507624 621 ntBASIC19.43■□□□□ 0.7
TREML4Q6UXN2 AC074183.2-201ENST00000623112 922 ntBASIC19.43■□□□□ 0.7
TREML4Q6UXN2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TREML4Q6UXN2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREML4Q6UXN2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.43■□□□□ 0.7
TREML4Q6UXN2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.42■□□□□ 0.7
TREML4Q6UXN2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 AC010980.1-201ENST00000587192 1142 ntBASIC19.41■□□□□ 0.7
TREML4Q6UXN2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.41■□□□□ 0.7
TREML4Q6UXN2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 YBX1P4-201ENST00000392794 808 ntBASIC19.4■□□□□ 0.7
TREML4Q6UXN2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREML4Q6UXN2 WHAMMP3-201ENST00000611636 1609 ntBASIC19.4■□□□□ 0.7
TREML4Q6UXN2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TREML4Q6UXN2 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.39■□□□□ 0.69
TREML4Q6UXN2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TREML4Q6UXN2 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.39■□□□□ 0.69
TREML4Q6UXN2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREML4Q6UXN2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TREML4Q6UXN2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TREML4Q6UXN2 GUSBP5-201ENST00000418136 578 ntBASIC19.38■□□□□ 0.69
TREML4Q6UXN2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREML4Q6UXN2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREML4Q6UXN2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREML4Q6UXN2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 ERN1-208ENST00000606895 2068 ntBASIC19.36■□□□□ 0.69
TREML4Q6UXN2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 DUX4L9-201ENST00000449051 1259 ntBASIC19.36■□□□□ 0.69
TREML4Q6UXN2 AC139795.1-202ENST00000500444 432 ntBASIC19.36■□□□□ 0.69
TREML4Q6UXN2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREML4Q6UXN2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TREML4Q6UXN2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREML4Q6UXN2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.35■□□□□ 0.69
TREML4Q6UXN2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TREML4Q6UXN2 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.35■□□□□ 0.69
TREML4Q6UXN2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREML4Q6UXN2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREML4Q6UXN2 SMPD5-203ENST00000639008 1464 ntBASIC19.35■□□□□ 0.69
TREML4Q6UXN2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TREML4Q6UXN2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREML4Q6UXN2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREML4Q6UXN2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREML4Q6UXN2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
TREML4Q6UXN2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 AC026202.3-201ENST00000600805 1127 ntBASIC19.33■□□□□ 0.68
TREML4Q6UXN2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 AC010501.1-201ENST00000606270 1962 ntBASIC19.33■□□□□ 0.68
TREML4Q6UXN2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREML4Q6UXN2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
TREML4Q6UXN2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREML4Q6UXN2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREML4Q6UXN2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TREML4Q6UXN2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREML4Q6UXN2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms