Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.75■□□□□ 0.91
KDM4BO94953 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDM4BO94953 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.75■□□□□ 0.91
KDM4BO94953 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.75■□□□□ 0.91
KDM4BO94953 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
KDM4BO94953 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDM4BO94953 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDM4BO94953 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.75■□□□□ 0.91
KDM4BO94953 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDM4BO94953 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDM4BO94953 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDM4BO94953 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.74■□□□□ 0.91
KDM4BO94953 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
KDM4BO94953 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KDM4BO94953 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDM4BO94953 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDM4BO94953 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.74■□□□□ 0.91
KDM4BO94953 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
KDM4BO94953 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KDM4BO94953 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KDM4BO94953 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.73■□□□□ 0.91
KDM4BO94953 AC096887.2-201ENST00000623443 1957 ntBASIC20.73■□□□□ 0.91
KDM4BO94953 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
KDM4BO94953 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 AL359258.2-201ENST00000564063 1566 ntBASIC20.72■□□□□ 0.91
KDM4BO94953 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.72■□□□□ 0.91
KDM4BO94953 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
KDM4BO94953 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.72■□□□□ 0.91
KDM4BO94953 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 MIR3648-2-201ENST00000581792 180 ntBASIC20.72■□□□□ 0.91
KDM4BO94953 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
KDM4BO94953 MIR3648-1-201ENST00000615959 180 ntBASIC20.72■□□□□ 0.91
KDM4BO94953 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.72■□□□□ 0.91
KDM4BO94953 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM4BO94953 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM4BO94953 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM4BO94953 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM4BO94953 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.71■□□□□ 0.91
KDM4BO94953 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KDM4BO94953 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDM4BO94953 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM4BO94953 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.71■□□□□ 0.91
KDM4BO94953 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDM4BO94953 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.71■□□□□ 0.91
KDM4BO94953 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
KDM4BO94953 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM4BO94953 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KDM4BO94953 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM4BO94953 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
KDM4BO94953 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KDM4BO94953 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDM4BO94953 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDM4BO94953 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KDM4BO94953 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.69■□□□□ 0.9
KDM4BO94953 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDM4BO94953 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDM4BO94953 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDM4BO94953 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDM4BO94953 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDM4BO94953 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KDM4BO94953 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDM4BO94953 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.68■□□□□ 0.9
KDM4BO94953 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.67■□□□□ 0.9
KDM4BO94953 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.67■□□□□ 0.9
KDM4BO94953 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
KDM4BO94953 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.67■□□□□ 0.9
KDM4BO94953 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KDM4BO94953 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDM4BO94953 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
KDM4BO94953 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
KDM4BO94953 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDM4BO94953 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
KDM4BO94953 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
KDM4BO94953 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDM4BO94953 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
KDM4BO94953 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KDM4BO94953 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.66■□□□□ 0.9
KDM4BO94953 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM4BO94953 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDM4BO94953 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM4BO94953 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.65■□□□□ 0.9
KDM4BO94953 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM4BO94953 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM4BO94953 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.65■□□□□ 0.9
KDM4BO94953 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM4BO94953 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
KDM4BO94953 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
KDM4BO94953 AL359504.2-201ENST00000605506 1601 ntBASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms