Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.76■■□□□ 1.55
OPHN1O60890 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
OPHN1O60890 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.75■■□□□ 1.55
OPHN1O60890 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
OPHN1O60890 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
OPHN1O60890 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
OPHN1O60890 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.75■■□□□ 1.55
OPHN1O60890 AL451085.2-201ENST00000605085 799 ntBASIC24.75■■□□□ 1.55
OPHN1O60890 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
OPHN1O60890 AC020928.2-201ENST00000588717 2197 ntBASIC24.74■■□□□ 1.55
OPHN1O60890 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
OPHN1O60890 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
OPHN1O60890 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
OPHN1O60890 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
OPHN1O60890 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
OPHN1O60890 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
OPHN1O60890 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
OPHN1O60890 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
OPHN1O60890 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
OPHN1O60890 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
OPHN1O60890 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
OPHN1O60890 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
OPHN1O60890 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
OPHN1O60890 SMPD5-203ENST00000639008 1464 ntBASIC24.72■■□□□ 1.55
OPHN1O60890 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
OPHN1O60890 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
OPHN1O60890 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
OPHN1O60890 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
OPHN1O60890 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
OPHN1O60890 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
OPHN1O60890 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
OPHN1O60890 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.71■■□□□ 1.55
OPHN1O60890 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.71■■□□□ 1.55
OPHN1O60890 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.71■■□□□ 1.55
OPHN1O60890 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
OPHN1O60890 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
OPHN1O60890 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.7■■□□□ 1.54
OPHN1O60890 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
OPHN1O60890 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.69■■□□□ 1.54
OPHN1O60890 BHLHE23-202ENST00000612929 1109 ntBASIC24.69■■□□□ 1.54
OPHN1O60890 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
OPHN1O60890 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
OPHN1O60890 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
OPHN1O60890 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
OPHN1O60890 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
OPHN1O60890 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
OPHN1O60890 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.68■■□□□ 1.54
OPHN1O60890 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
OPHN1O60890 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
OPHN1O60890 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.68■■□□□ 1.54
OPHN1O60890 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
OPHN1O60890 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.67■■□□□ 1.54
OPHN1O60890 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
OPHN1O60890 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.67■■□□□ 1.54
OPHN1O60890 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.67■■□□□ 1.54
OPHN1O60890 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
OPHN1O60890 AC025884.2-201ENST00000553429 711 ntBASIC24.67■■□□□ 1.54
OPHN1O60890 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
OPHN1O60890 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.67■■□□□ 1.54
OPHN1O60890 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.66■■□□□ 1.54
OPHN1O60890 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
OPHN1O60890 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
OPHN1O60890 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.66■■□□□ 1.54
OPHN1O60890 AC096887.2-201ENST00000623443 1957 ntBASIC24.66■■□□□ 1.54
OPHN1O60890 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
OPHN1O60890 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
OPHN1O60890 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.66■■□□□ 1.54
OPHN1O60890 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.66■■□□□ 1.54
OPHN1O60890 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
OPHN1O60890 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
OPHN1O60890 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
OPHN1O60890 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
OPHN1O60890 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
OPHN1O60890 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
OPHN1O60890 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
OPHN1O60890 AC026202.3-201ENST00000600805 1127 ntBASIC24.65■■□□□ 1.54
OPHN1O60890 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
OPHN1O60890 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
OPHN1O60890 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
OPHN1O60890 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.64■■□□□ 1.54
OPHN1O60890 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
OPHN1O60890 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
OPHN1O60890 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
OPHN1O60890 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
OPHN1O60890 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
OPHN1O60890 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
OPHN1O60890 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
OPHN1O60890 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.63■■□□□ 1.53
OPHN1O60890 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.63■■□□□ 1.53
OPHN1O60890 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
OPHN1O60890 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.62■■□□□ 1.53
OPHN1O60890 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
OPHN1O60890 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.62■■□□□ 1.53
OPHN1O60890 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
OPHN1O60890 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
OPHN1O60890 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
OPHN1O60890 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
OPHN1O60890 AL592295.1-201ENST00000400984 884 ntBASIC24.61■■□□□ 1.53
OPHN1O60890 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.61■■□□□ 1.53
OPHN1O60890 DUX4L9-201ENST00000449051 1259 ntBASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms