Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TRDV1A0A1B0GX56 DUSP8P5-201ENST00000422884 1815 ntBASIC21.02■□□□□ 0.96
TRDV1A0A1B0GX56 SLC6A10P-202ENST00000431994 2058 ntBASIC21.02■□□□□ 0.96
TRDV1A0A1B0GX56 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRDV1A0A1B0GX56 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRDV1A0A1B0GX56 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRDV1A0A1B0GX56 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRDV1A0A1B0GX56 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRDV1A0A1B0GX56 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRDV1A0A1B0GX56 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRDV1A0A1B0GX56 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRDV1A0A1B0GX56 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRDV1A0A1B0GX56 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRDV1A0A1B0GX56 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRDV1A0A1B0GX56 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.99■□□□□ 0.95
TRDV1A0A1B0GX56 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.99■□□□□ 0.95
TRDV1A0A1B0GX56 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRDV1A0A1B0GX56 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRDV1A0A1B0GX56 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRDV1A0A1B0GX56 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRDV1A0A1B0GX56 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRDV1A0A1B0GX56 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRDV1A0A1B0GX56 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRDV1A0A1B0GX56 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRDV1A0A1B0GX56 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRDV1A0A1B0GX56 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.96■□□□□ 0.95
TRDV1A0A1B0GX56 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRDV1A0A1B0GX56 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRDV1A0A1B0GX56 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRDV1A0A1B0GX56 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRDV1A0A1B0GX56 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 MIR3665-201ENST00000578708 105 ntBASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRDV1A0A1B0GX56 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.94■□□□□ 0.94
TRDV1A0A1B0GX56 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.94■□□□□ 0.94
TRDV1A0A1B0GX56 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRDV1A0A1B0GX56 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.94■□□□□ 0.94
TRDV1A0A1B0GX56 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRDV1A0A1B0GX56 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRDV1A0A1B0GX56 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.94■□□□□ 0.94
TRDV1A0A1B0GX56 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRDV1A0A1B0GX56 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRDV1A0A1B0GX56 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRDV1A0A1B0GX56 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.93■□□□□ 0.94
TRDV1A0A1B0GX56 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRDV1A0A1B0GX56 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRDV1A0A1B0GX56 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRDV1A0A1B0GX56 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.91■□□□□ 0.94
TRDV1A0A1B0GX56 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRDV1A0A1B0GX56 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.89■□□□□ 0.94
TRDV1A0A1B0GX56 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRDV1A0A1B0GX56 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
TRDV1A0A1B0GX56 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRDV1A0A1B0GX56 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.88■□□□□ 0.93
TRDV1A0A1B0GX56 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRDV1A0A1B0GX56 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRDV1A0A1B0GX56 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRDV1A0A1B0GX56 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRDV1A0A1B0GX56 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRDV1A0A1B0GX56 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms