Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.4■■□□□ 1.34
LRIT1Q9P2V4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LRIT1Q9P2V4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LRIT1Q9P2V4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.4■■□□□ 1.34
LRIT1Q9P2V4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
LRIT1Q9P2V4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LRIT1Q9P2V4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.38■■□□□ 1.33
LRIT1Q9P2V4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.38■■□□□ 1.33
LRIT1Q9P2V4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.38■■□□□ 1.33
LRIT1Q9P2V4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.38■■□□□ 1.33
LRIT1Q9P2V4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
LRIT1Q9P2V4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.37■■□□□ 1.33
LRIT1Q9P2V4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
LRIT1Q9P2V4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRIT1Q9P2V4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRIT1Q9P2V4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRIT1Q9P2V4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRIT1Q9P2V4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.36■■□□□ 1.33
LRIT1Q9P2V4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
LRIT1Q9P2V4 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.36■■□□□ 1.33
LRIT1Q9P2V4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LRIT1Q9P2V4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRIT1Q9P2V4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.35■■□□□ 1.33
LRIT1Q9P2V4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRIT1Q9P2V4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
LRIT1Q9P2V4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRIT1Q9P2V4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRIT1Q9P2V4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.34■■□□□ 1.33
LRIT1Q9P2V4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRIT1Q9P2V4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRIT1Q9P2V4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRIT1Q9P2V4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.34■■□□□ 1.33
LRIT1Q9P2V4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.34■■□□□ 1.33
LRIT1Q9P2V4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
LRIT1Q9P2V4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
LRIT1Q9P2V4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 GUSBP5-201ENST00000418136 578 ntBASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LRIT1Q9P2V4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRIT1Q9P2V4 AC022616.5-201ENST00000518796 181 ntBASIC23.31■■□□□ 1.32
LRIT1Q9P2V4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRIT1Q9P2V4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRIT1Q9P2V4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRIT1Q9P2V4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.3■■□□□ 1.32
LRIT1Q9P2V4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRIT1Q9P2V4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.3■■□□□ 1.32
LRIT1Q9P2V4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRIT1Q9P2V4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRIT1Q9P2V4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRIT1Q9P2V4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRIT1Q9P2V4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.29■■□□□ 1.32
LRIT1Q9P2V4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 AC239859.2-201ENST00000444165 318 ntBASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
LRIT1Q9P2V4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRIT1Q9P2V4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.27■■□□□ 1.32
LRIT1Q9P2V4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.27■■□□□ 1.32
LRIT1Q9P2V4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LRIT1Q9P2V4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
LRIT1Q9P2V4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
LRIT1Q9P2V4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.25■■□□□ 1.31
LRIT1Q9P2V4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRIT1Q9P2V4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.25■■□□□ 1.31
LRIT1Q9P2V4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRIT1Q9P2V4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRIT1Q9P2V4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRIT1Q9P2V4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.24■■□□□ 1.31
LRIT1Q9P2V4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.24■■□□□ 1.31
LRIT1Q9P2V4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRIT1Q9P2V4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
LRIT1Q9P2V4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
LRIT1Q9P2V4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRIT1Q9P2V4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms