Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CMSS1Q9BQ75 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CMSS1Q9BQ75 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.33■□□□□ 0.85
CMSS1Q9BQ75 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CMSS1Q9BQ75 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
CMSS1Q9BQ75 AL359258.2-201ENST00000564063 1566 ntBASIC20.33■□□□□ 0.84
CMSS1Q9BQ75 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CMSS1Q9BQ75 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CMSS1Q9BQ75 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CMSS1Q9BQ75 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 DUX4L11-201ENST00000611504 1267 ntBASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 DUX4L12-201ENST00000614593 1267 ntBASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 DUX4L14-201ENST00000621227 1267 ntBASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMSS1Q9BQ75 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CMSS1Q9BQ75 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.3■□□□□ 0.84
CMSS1Q9BQ75 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CMSS1Q9BQ75 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CMSS1Q9BQ75 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CMSS1Q9BQ75 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CMSS1Q9BQ75 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CMSS1Q9BQ75 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CMSS1Q9BQ75 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CMSS1Q9BQ75 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CMSS1Q9BQ75 AL359504.2-201ENST00000605506 1601 ntBASIC20.29■□□□□ 0.84
CMSS1Q9BQ75 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.29■□□□□ 0.84
CMSS1Q9BQ75 AC138932.3-201ENST00000567634 1902 ntBASIC20.29■□□□□ 0.84
CMSS1Q9BQ75 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CMSS1Q9BQ75 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 RPS2P35-201ENST00000443417 897 ntBASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CMSS1Q9BQ75 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CMSS1Q9BQ75 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 HLA-V-202ENST00000446817 847 ntBASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CMSS1Q9BQ75 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CMSS1Q9BQ75 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 AC133561.1-201ENST00000568600 2415 ntBASIC20.24■□□□□ 0.83
CMSS1Q9BQ75 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMSS1Q9BQ75 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMSS1Q9BQ75 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMSS1Q9BQ75 AL139125.2-201ENST00000623134 1869 ntBASIC20.23■□□□□ 0.83
CMSS1Q9BQ75 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.23■□□□□ 0.83
CMSS1Q9BQ75 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMSS1Q9BQ75 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CMSS1Q9BQ75 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMSS1Q9BQ75 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms