Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01561Q8N1V8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01561Q8N1V8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LINC01561Q8N1V8 AC141586.4-201ENST00000624558 1573 ntBASIC16.05■□□□□ 0.16
LINC01561Q8N1V8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01561Q8N1V8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01561Q8N1V8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01561Q8N1V8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LINC01561Q8N1V8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01561Q8N1V8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01561Q8N1V8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 DUX4L11-201ENST00000611504 1267 ntBASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 DUX4L12-201ENST00000614593 1267 ntBASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 DUX4L14-201ENST00000621227 1267 ntBASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01561Q8N1V8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.02■□□□□ 0.16
LINC01561Q8N1V8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01561Q8N1V8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01561Q8N1V8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01561Q8N1V8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
LINC01561Q8N1V8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LINC01561Q8N1V8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16■□□□□ 0.15
LINC01561Q8N1V8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16■□□□□ 0.15
LINC01561Q8N1V8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01561Q8N1V8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 HLA-V-202ENST00000446817 847 ntBASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms