Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
SIX5Q8N196 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
SIX5Q8N196 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SIX5Q8N196 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SIX5Q8N196 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SIX5Q8N196 KRT18P10-201ENST00000388836 1287 ntBASIC24.79■■□□□ 1.56
SIX5Q8N196 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.79■■□□□ 1.56
SIX5Q8N196 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.79■■□□□ 1.56
SIX5Q8N196 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.79■■□□□ 1.56
SIX5Q8N196 AC092028.1-203ENST00000608262 953 ntBASIC24.79■■□□□ 1.56
SIX5Q8N196 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SIX5Q8N196 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.78■■□□□ 1.56
SIX5Q8N196 AC120024.1-201ENST00000562672 995 ntBASIC24.78■■□□□ 1.56
SIX5Q8N196 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.78■■□□□ 1.56
SIX5Q8N196 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SIX5Q8N196 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
SIX5Q8N196 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.77■■□□□ 1.56
SIX5Q8N196 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.77■■□□□ 1.56
SIX5Q8N196 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.77■■□□□ 1.56
SIX5Q8N196 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.77■■□□□ 1.56
SIX5Q8N196 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SIX5Q8N196 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.76■■□□□ 1.55
SIX5Q8N196 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.76■■□□□ 1.55
SIX5Q8N196 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
SIX5Q8N196 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
SIX5Q8N196 AC110285.6-201ENST00000617652 491 ntBASIC24.76■■□□□ 1.55
SIX5Q8N196 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SIX5Q8N196 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SIX5Q8N196 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
SIX5Q8N196 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SIX5Q8N196 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SIX5Q8N196 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.74■■□□□ 1.55
SIX5Q8N196 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SIX5Q8N196 AC005837.3-201ENST00000612163 286 ntBASIC24.74■■□□□ 1.55
SIX5Q8N196 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.73■■□□□ 1.55
SIX5Q8N196 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SIX5Q8N196 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
SIX5Q8N196 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SIX5Q8N196 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
SIX5Q8N196 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.72■■□□□ 1.55
SIX5Q8N196 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SIX5Q8N196 AL117332.1-201ENST00000622628 974 ntBASIC24.72■■□□□ 1.55
SIX5Q8N196 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SIX5Q8N196 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SIX5Q8N196 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SIX5Q8N196 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SIX5Q8N196 AC096631.2-201ENST00000436136 790 ntBASIC24.71■■□□□ 1.55
SIX5Q8N196 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
SIX5Q8N196 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SIX5Q8N196 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SIX5Q8N196 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
SIX5Q8N196 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.7■■□□□ 1.55
SIX5Q8N196 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SIX5Q8N196 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SIX5Q8N196 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SIX5Q8N196 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SIX5Q8N196 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.7■■□□□ 1.54
SIX5Q8N196 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SIX5Q8N196 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SIX5Q8N196 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.69■■□□□ 1.54
SIX5Q8N196 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SIX5Q8N196 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SIX5Q8N196 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.69■■□□□ 1.54
SIX5Q8N196 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SIX5Q8N196 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SIX5Q8N196 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SIX5Q8N196 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SIX5Q8N196 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.68■■□□□ 1.54
SIX5Q8N196 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.68■■□□□ 1.54
SIX5Q8N196 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.68■■□□□ 1.54
SIX5Q8N196 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.68■■□□□ 1.54
SIX5Q8N196 AC010997.5-201ENST00000609182 354 ntBASIC24.68■■□□□ 1.54
SIX5Q8N196 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SIX5Q8N196 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SIX5Q8N196 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SIX5Q8N196 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SIX5Q8N196 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SIX5Q8N196 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.67■■□□□ 1.54
SIX5Q8N196 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.67■■□□□ 1.54
SIX5Q8N196 MIR3621-201ENST00000580529 85 ntBASIC24.67■■□□□ 1.54
SIX5Q8N196 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SIX5Q8N196 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SIX5Q8N196 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SIX5Q8N196 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SIX5Q8N196 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SIX5Q8N196 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.65■■□□□ 1.54
SIX5Q8N196 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SIX5Q8N196 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SIX5Q8N196 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SIX5Q8N196 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SIX5Q8N196 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
SIX5Q8N196 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SIX5Q8N196 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SIX5Q8N196 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SIX5Q8N196 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
SIX5Q8N196 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.63■■□□□ 1.53
SIX5Q8N196 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.63■■□□□ 1.53
SIX5Q8N196 MIR6724-1-201ENST00000616420 92 ntBASIC24.63■■□□□ 1.53
SIX5Q8N196 MIR6724-2-201ENST00000616483 92 ntBASIC24.63■■□□□ 1.53
SIX5Q8N196 MIR6724-4-201ENST00000617390 92 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms