Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBA1AQ71U36 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.96■■□□□ 1.11
TUBA1AQ71U36 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.96■■□□□ 1.11
TUBA1AQ71U36 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBA1AQ71U36 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
TUBA1AQ71U36 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TUBA1AQ71U36 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TUBA1AQ71U36 AC148477.6-201ENST00000623746 465 ntBASIC21.95■■□□□ 1.1
TUBA1AQ71U36 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 AP004609.3-201ENST00000610705 1884 ntBASIC21.94■■□□□ 1.1
TUBA1AQ71U36 AL139125.2-201ENST00000623134 1869 ntBASIC21.94■■□□□ 1.1
TUBA1AQ71U36 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 LINC00543-201ENST00000567234 1845 ntBASIC21.94■■□□□ 1.1
TUBA1AQ71U36 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.94■■□□□ 1.1
TUBA1AQ71U36 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
TUBA1AQ71U36 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TUBA1AQ71U36 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TUBA1AQ71U36 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TUBA1AQ71U36 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.92■■□□□ 1.1
TUBA1AQ71U36 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBA1AQ71U36 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.91■■□□□ 1.1
TUBA1AQ71U36 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TUBA1AQ71U36 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TUBA1AQ71U36 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TUBA1AQ71U36 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TUBA1AQ71U36 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.9■■□□□ 1.1
TUBA1AQ71U36 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TUBA1AQ71U36 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TUBA1AQ71U36 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TUBA1AQ71U36 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TUBA1AQ71U36 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.89■■□□□ 1.09
TUBA1AQ71U36 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TUBA1AQ71U36 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TUBA1AQ71U36 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TUBA1AQ71U36 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TUBA1AQ71U36 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TUBA1AQ71U36 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TUBA1AQ71U36 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TUBA1AQ71U36 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TUBA1AQ71U36 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TUBA1AQ71U36 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TUBA1AQ71U36 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TUBA1AQ71U36 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TUBA1AQ71U36 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TUBA1AQ71U36 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TUBA1AQ71U36 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TUBA1AQ71U36 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TUBA1AQ71U36 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TUBA1AQ71U36 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.86■■□□□ 1.09
TUBA1AQ71U36 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TUBA1AQ71U36 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TUBA1AQ71U36 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TUBA1AQ71U36 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TUBA1AQ71U36 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.85■■□□□ 1.09
TUBA1AQ71U36 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.85■■□□□ 1.09
TUBA1AQ71U36 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TUBA1AQ71U36 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.85■■□□□ 1.09
TUBA1AQ71U36 AC079834.2-201ENST00000609776 1949 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms