Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PTCHD4Q6ZW05 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCHD4Q6ZW05 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCHD4Q6ZW05 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCHD4Q6ZW05 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCHD4Q6ZW05 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PTCHD4Q6ZW05 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.94■■□□□ 1.1
PTCHD4Q6ZW05 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCHD4Q6ZW05 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 AC148477.6-201ENST00000623746 465 ntBASIC21.93■■□□□ 1.1
PTCHD4Q6ZW05 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 HLA-V-202ENST00000446817 847 ntBASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PTCHD4Q6ZW05 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.91■■□□□ 1.1
PTCHD4Q6ZW05 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCHD4Q6ZW05 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCHD4Q6ZW05 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTCHD4Q6ZW05 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTCHD4Q6ZW05 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 AC096887.2-201ENST00000623443 1957 ntBASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCHD4Q6ZW05 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTCHD4Q6ZW05 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTCHD4Q6ZW05 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.89■■□□□ 1.09
PTCHD4Q6ZW05 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTCHD4Q6ZW05 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCHD4Q6ZW05 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PTCHD4Q6ZW05 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
PTCHD4Q6ZW05 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCHD4Q6ZW05 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTCHD4Q6ZW05 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCHD4Q6ZW05 CR559946.2-201ENST00000623684 991 ntBASIC21.86■■□□□ 1.09
PTCHD4Q6ZW05 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTCHD4Q6ZW05 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCHD4Q6ZW05 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCHD4Q6ZW05 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCHD4Q6ZW05 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.85■■□□□ 1.09
PTCHD4Q6ZW05 ABHD17AP4-201ENST00000411545 909 ntBASIC21.85■■□□□ 1.09
PTCHD4Q6ZW05 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.85■■□□□ 1.09
PTCHD4Q6ZW05 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.85■■□□□ 1.09
PTCHD4Q6ZW05 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCHD4Q6ZW05 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCHD4Q6ZW05 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms