Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.56■■□□□ 1.04
NHLRC1Q6VVB1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NHLRC1Q6VVB1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 AC007029.1-201ENST00000604183 313 ntBASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 AC096887.2-201ENST00000623443 1957 ntBASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 RNF126P1-201ENST00000567452 1320 ntBASIC21.55■■□□□ 1.04
NHLRC1Q6VVB1 RP9P-202ENST00000450133 1212 ntBASIC21.54■■□□□ 1.04
NHLRC1Q6VVB1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.54■■□□□ 1.04
NHLRC1Q6VVB1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.54■■□□□ 1.04
NHLRC1Q6VVB1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NHLRC1Q6VVB1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NHLRC1Q6VVB1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NHLRC1Q6VVB1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.53■■□□□ 1.04
NHLRC1Q6VVB1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
NHLRC1Q6VVB1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.53■■□□□ 1.04
NHLRC1Q6VVB1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NHLRC1Q6VVB1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NHLRC1Q6VVB1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NHLRC1Q6VVB1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NHLRC1Q6VVB1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NHLRC1Q6VVB1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.52■■□□□ 1.04
NHLRC1Q6VVB1 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.52■■□□□ 1.04
NHLRC1Q6VVB1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NHLRC1Q6VVB1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NHLRC1Q6VVB1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.51■■□□□ 1.03
NHLRC1Q6VVB1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NHLRC1Q6VVB1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NHLRC1Q6VVB1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
NHLRC1Q6VVB1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NHLRC1Q6VVB1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.51■■□□□ 1.03
NHLRC1Q6VVB1 AC093536.1-201ENST00000569153 554 ntBASIC21.5■■□□□ 1.03
NHLRC1Q6VVB1 RAP2CP1-202ENST00000605179 643 ntBASIC21.5■■□□□ 1.03
NHLRC1Q6VVB1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NHLRC1Q6VVB1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NHLRC1Q6VVB1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NHLRC1Q6VVB1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NHLRC1Q6VVB1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NHLRC1Q6VVB1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NHLRC1Q6VVB1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NHLRC1Q6VVB1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.49■■□□□ 1.03
NHLRC1Q6VVB1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.49■■□□□ 1.03
NHLRC1Q6VVB1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 HSD17B1P1-201ENST00000590052 955 ntBASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 AC026202.3-201ENST00000600805 1127 ntBASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NHLRC1Q6VVB1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NHLRC1Q6VVB1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NHLRC1Q6VVB1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NHLRC1Q6VVB1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.46■■□□□ 1.03
NHLRC1Q6VVB1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NHLRC1Q6VVB1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.46■■□□□ 1.03
NHLRC1Q6VVB1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NHLRC1Q6VVB1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NHLRC1Q6VVB1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.45■■□□□ 1.02
NHLRC1Q6VVB1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NHLRC1Q6VVB1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.45■■□□□ 1.02
NHLRC1Q6VVB1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NHLRC1Q6VVB1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NHLRC1Q6VVB1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.44■■□□□ 1.02
NHLRC1Q6VVB1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NHLRC1Q6VVB1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.44■■□□□ 1.02
NHLRC1Q6VVB1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NHLRC1Q6VVB1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NHLRC1Q6VVB1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NHLRC1Q6VVB1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NHLRC1Q6VVB1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NHLRC1Q6VVB1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NHLRC1Q6VVB1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
NHLRC1Q6VVB1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NHLRC1Q6VVB1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NHLRC1Q6VVB1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.42■■□□□ 1.02
NHLRC1Q6VVB1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.42■■□□□ 1.02
NHLRC1Q6VVB1 AC020928.2-201ENST00000588717 2197 ntBASIC21.42■■□□□ 1.02
NHLRC1Q6VVB1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NHLRC1Q6VVB1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NHLRC1Q6VVB1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.41■■□□□ 1.02
NHLRC1Q6VVB1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
NHLRC1Q6VVB1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
NHLRC1Q6VVB1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NHLRC1Q6VVB1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NHLRC1Q6VVB1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 AC009831.1-201ENST00000580420 1582 ntBASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 RARRES2P2-201ENST00000394842 485 ntBASIC21.4■■□□□ 1.02
NHLRC1Q6VVB1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms