Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSM6P62312 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LSM6P62312 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.13■□□□□ 0.97
LSM6P62312 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LSM6P62312 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LSM6P62312 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM6P62312 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSM6P62312 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM6P62312 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.12■□□□□ 0.97
LSM6P62312 AC007029.1-201ENST00000604183 313 ntBASIC21.12■□□□□ 0.97
LSM6P62312 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM6P62312 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSM6P62312 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.12■□□□□ 0.97
LSM6P62312 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
LSM6P62312 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LSM6P62312 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.11■□□□□ 0.97
LSM6P62312 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSM6P62312 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSM6P62312 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.11■□□□□ 0.97
LSM6P62312 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSM6P62312 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LSM6P62312 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSM6P62312 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSM6P62312 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSM6P62312 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LSM6P62312 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LSM6P62312 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.1■□□□□ 0.97
LSM6P62312 AC093536.1-201ENST00000569153 554 ntBASIC21.1■□□□□ 0.97
LSM6P62312 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LSM6P62312 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.09■□□□□ 0.97
LSM6P62312 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.09■□□□□ 0.97
LSM6P62312 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM6P62312 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM6P62312 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM6P62312 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LSM6P62312 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LSM6P62312 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
LSM6P62312 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LSM6P62312 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LSM6P62312 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.08■□□□□ 0.96
LSM6P62312 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LSM6P62312 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.07■□□□□ 0.96
LSM6P62312 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LSM6P62312 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.07■□□□□ 0.96
LSM6P62312 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.07■□□□□ 0.96
LSM6P62312 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.07■□□□□ 0.96
LSM6P62312 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LSM6P62312 AC097639.1-201ENST00000565519 1891 ntBASIC21.07■□□□□ 0.96
LSM6P62312 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM6P62312 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM6P62312 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM6P62312 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM6P62312 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM6P62312 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM6P62312 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.05■□□□□ 0.96
LSM6P62312 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM6P62312 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.05■□□□□ 0.96
LSM6P62312 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM6P62312 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.05■□□□□ 0.96
LSM6P62312 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.05■□□□□ 0.96
LSM6P62312 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.04■□□□□ 0.96
LSM6P62312 RNF126P1-201ENST00000567452 1320 ntBASIC21.04■□□□□ 0.96
LSM6P62312 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM6P62312 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LSM6P62312 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LSM6P62312 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LSM6P62312 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.04■□□□□ 0.96
LSM6P62312 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM6P62312 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM6P62312 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.04■□□□□ 0.96
LSM6P62312 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM6P62312 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM6P62312 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM6P62312 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM6P62312 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM6P62312 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.03■□□□□ 0.96
LSM6P62312 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
LSM6P62312 RAP2CP1-202ENST00000605179 643 ntBASIC21.03■□□□□ 0.96
LSM6P62312 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM6P62312 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM6P62312 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
LSM6P62312 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LSM6P62312 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM6P62312 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM6P62312 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LSM6P62312 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LSM6P62312 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LSM6P62312 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM6P62312 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
LSM6P62312 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LSM6P62312 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM6P62312 AC026202.3-201ENST00000600805 1127 ntBASIC21.01■□□□□ 0.95
LSM6P62312 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LSM6P62312 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.01■□□□□ 0.95
LSM6P62312 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.01■□□□□ 0.95
LSM6P62312 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM6P62312 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
LSM6P62312 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSM6P62312 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21■□□□□ 0.95
LSM6P62312 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms