Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.26■■□□□ 1.79
TTC3P53804 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC3P53804 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TTC3P53804 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.25■■□□□ 1.79
TTC3P53804 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TTC3P53804 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
TTC3P53804 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TTC3P53804 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
TTC3P53804 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
TTC3P53804 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.24■■□□□ 1.79
TTC3P53804 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TTC3P53804 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.24■■□□□ 1.79
TTC3P53804 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.24■■□□□ 1.79
TTC3P53804 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC3P53804 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.23■■□□□ 1.79
TTC3P53804 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC3P53804 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC3P53804 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC3P53804 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC3P53804 BX664725.1-201ENST00000438252 379 ntBASIC26.22■■□□□ 1.79
TTC3P53804 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC3P53804 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.22■■□□□ 1.79
TTC3P53804 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.21■■□□□ 1.79
TTC3P53804 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.21■■□□□ 1.79
TTC3P53804 MIR4787-201ENST00000607364 84 ntBASIC26.21■■□□□ 1.79
TTC3P53804 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
TTC3P53804 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TTC3P53804 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC3P53804 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
TTC3P53804 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
TTC3P53804 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
TTC3P53804 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
TTC3P53804 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC3P53804 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.19■■□□□ 1.78
TTC3P53804 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TTC3P53804 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC3P53804 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC3P53804 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TTC3P53804 BX255925.1-201ENST00000566954 1854 ntBASIC26.18■■□□□ 1.78
TTC3P53804 KRT125P-201ENST00000546827 989 ntBASIC26.18■■□□□ 1.78
TTC3P53804 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.18■■□□□ 1.78
TTC3P53804 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC3P53804 KRT18P24-201ENST00000344739 1156 ntBASIC26.17■■□□□ 1.78
TTC3P53804 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TTC3P53804 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC3P53804 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC3P53804 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC3P53804 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.17■■□□□ 1.78
TTC3P53804 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.17■■□□□ 1.78
TTC3P53804 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC3P53804 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.16■■□□□ 1.78
TTC3P53804 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TTC3P53804 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC3P53804 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.15■■□□□ 1.78
TTC3P53804 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TTC3P53804 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.15■■□□□ 1.78
TTC3P53804 UNC93B8-201ENST00000511903 705 ntBASIC26.15■■□□□ 1.78
TTC3P53804 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.15■■□□□ 1.78
TTC3P53804 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.14■■□□□ 1.78
TTC3P53804 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
TTC3P53804 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.14■■□□□ 1.78
TTC3P53804 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TTC3P53804 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TTC3P53804 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TTC3P53804 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TTC3P53804 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.14■■□□□ 1.77
TTC3P53804 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TTC3P53804 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TTC3P53804 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.13■■□□□ 1.77
TTC3P53804 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.13■■□□□ 1.77
TTC3P53804 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.12■■□□□ 1.77
TTC3P53804 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC3P53804 AC137630.3-201ENST00000607245 391 ntBASIC26.12■■□□□ 1.77
TTC3P53804 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.12■■□□□ 1.77
TTC3P53804 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TTC3P53804 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TTC3P53804 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
TTC3P53804 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
TTC3P53804 KRT16P3-201ENST00000439127 1283 ntBASIC26.1■■□□□ 1.77
TTC3P53804 AC142472.1-201ENST00000612013 1741 ntBASIC26.1■■□□□ 1.77
TTC3P53804 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TTC3P53804 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TTC3P53804 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.1■■□□□ 1.77
TTC3P53804 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TTC3P53804 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC3P53804 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC3P53804 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC3P53804 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.09■■□□□ 1.77
TTC3P53804 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
TTC3P53804 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC3P53804 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TTC3P53804 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TTC3P53804 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TTC3P53804 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TTC3P53804 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
TTC3P53804 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC3P53804 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC3P53804 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC3P53804 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
TTC3P53804 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms