Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTR3AP46098 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HTR3AP46098 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HTR3AP46098 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HTR3AP46098 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.07■■□□□ 1.12
HTR3AP46098 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.07■■□□□ 1.12
HTR3AP46098 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTR3AP46098 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTR3AP46098 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.07■■□□□ 1.12
HTR3AP46098 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTR3AP46098 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTR3AP46098 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTR3AP46098 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTR3AP46098 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.07■■□□□ 1.12
HTR3AP46098 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTR3AP46098 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
HTR3AP46098 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTR3AP46098 AC145676.1-201ENST00000514988 2004 ntBASIC22.06■■□□□ 1.12
HTR3AP46098 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
HTR3AP46098 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.06■■□□□ 1.12
HTR3AP46098 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.06■■□□□ 1.12
HTR3AP46098 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.06■■□□□ 1.12
HTR3AP46098 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTR3AP46098 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HTR3AP46098 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HTR3AP46098 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HTR3AP46098 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.05■■□□□ 1.12
HTR3AP46098 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HTR3AP46098 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HTR3AP46098 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
HTR3AP46098 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HTR3AP46098 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.04■■□□□ 1.12
HTR3AP46098 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.04■■□□□ 1.12
HTR3AP46098 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.04■■□□□ 1.12
HTR3AP46098 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HTR3AP46098 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.03■■□□□ 1.12
HTR3AP46098 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HTR3AP46098 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.03■■□□□ 1.12
HTR3AP46098 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HTR3AP46098 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HTR3AP46098 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HTR3AP46098 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HTR3AP46098 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HTR3AP46098 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.02■■□□□ 1.12
HTR3AP46098 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.02■■□□□ 1.12
HTR3AP46098 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HTR3AP46098 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HTR3AP46098 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HTR3AP46098 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HTR3AP46098 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HTR3AP46098 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.01■■□□□ 1.11
HTR3AP46098 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
HTR3AP46098 DUSP8P4-201ENST00000399538 1761 ntBASIC22.01■■□□□ 1.11
HTR3AP46098 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
HTR3AP46098 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.01■■□□□ 1.11
HTR3AP46098 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
HTR3AP46098 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22■■□□□ 1.11
HTR3AP46098 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22■■□□□ 1.11
HTR3AP46098 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.99■■□□□ 1.11
HTR3AP46098 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HTR3AP46098 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.99■■□□□ 1.11
HTR3AP46098 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HTR3AP46098 RNF126P1-201ENST00000567452 1320 ntBASIC21.99■■□□□ 1.11
HTR3AP46098 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HTR3AP46098 RP9P-202ENST00000450133 1212 ntBASIC21.98■■□□□ 1.11
HTR3AP46098 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HTR3AP46098 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HTR3AP46098 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HTR3AP46098 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HTR3AP46098 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
HTR3AP46098 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.97■■□□□ 1.11
HTR3AP46098 AC007029.1-201ENST00000604183 313 ntBASIC21.97■■□□□ 1.11
HTR3AP46098 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HTR3AP46098 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HTR3AP46098 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.96■■□□□ 1.11
HTR3AP46098 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR3AP46098 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR3AP46098 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HTR3AP46098 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.96■■□□□ 1.11
HTR3AP46098 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HTR3AP46098 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR3AP46098 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HTR3AP46098 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR3AP46098 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR3AP46098 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.95■■□□□ 1.1
HTR3AP46098 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.95■■□□□ 1.1
HTR3AP46098 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR3AP46098 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HTR3AP46098 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR3AP46098 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR3AP46098 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR3AP46098 AC010501.1-201ENST00000606270 1962 ntBASIC21.94■■□□□ 1.1
HTR3AP46098 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTR3AP46098 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.94■■□□□ 1.1
HTR3AP46098 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTR3AP46098 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.94■■□□□ 1.1
HTR3AP46098 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HTR3AP46098 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
HTR3AP46098 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTR3AP46098 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms