Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ATP6V1AP38606 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ATP6V1AP38606 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ATP6V1AP38606 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.14■■■□□ 2.58
ATP6V1AP38606 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.14■■■□□ 2.58
ATP6V1AP38606 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
ATP6V1AP38606 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
ATP6V1AP38606 TSPY9P-201ENST00000440215 945 ntBASIC31.13■■■□□ 2.57
ATP6V1AP38606 TSPY11P-201ENST00000442607 1045 ntBASIC31.13■■■□□ 2.57
ATP6V1AP38606 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ATP6V1AP38606 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ATP6V1AP38606 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
ATP6V1AP38606 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ATP6V1AP38606 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ATP6V1AP38606 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ATP6V1AP38606 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.12■■■□□ 2.57
ATP6V1AP38606 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ATP6V1AP38606 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ATP6V1AP38606 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.11■■■□□ 2.57
ATP6V1AP38606 AC120024.1-201ENST00000562672 995 ntBASIC31.11■■■□□ 2.57
ATP6V1AP38606 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP6V1AP38606 AC021242.3-201ENST00000607598 1377 ntBASIC31.1■■■□□ 2.57
ATP6V1AP38606 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
ATP6V1AP38606 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ATP6V1AP38606 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
ATP6V1AP38606 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ATP6V1AP38606 MIR638-201ENST00000385237 100 ntBASIC31.08■■■□□ 2.57
ATP6V1AP38606 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.08■■■□□ 2.57
ATP6V1AP38606 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ATP6V1AP38606 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ATP6V1AP38606 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
ATP6V1AP38606 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.08■■■□□ 2.57
ATP6V1AP38606 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ATP6V1AP38606 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ATP6V1AP38606 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.07■■■□□ 2.56
ATP6V1AP38606 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.07■■■□□ 2.56
ATP6V1AP38606 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ATP6V1AP38606 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.06■■■□□ 2.56
ATP6V1AP38606 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ATP6V1AP38606 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
ATP6V1AP38606 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.05■■■□□ 2.56
ATP6V1AP38606 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ATP6V1AP38606 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.05■■■□□ 2.56
ATP6V1AP38606 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ATP6V1AP38606 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.05■■■□□ 2.56
ATP6V1AP38606 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ATP6V1AP38606 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ATP6V1AP38606 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ATP6V1AP38606 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ATP6V1AP38606 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.04■■■□□ 2.56
ATP6V1AP38606 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ATP6V1AP38606 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ATP6V1AP38606 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.03■■■□□ 2.56
ATP6V1AP38606 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.02■■■□□ 2.56
ATP6V1AP38606 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.02■■■□□ 2.56
ATP6V1AP38606 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.02■■■□□ 2.56
ATP6V1AP38606 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.02■■■□□ 2.56
ATP6V1AP38606 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.02■■■□□ 2.56
ATP6V1AP38606 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
ATP6V1AP38606 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ATP6V1AP38606 AC092028.1-203ENST00000608262 953 ntBASIC31.01■■■□□ 2.55
ATP6V1AP38606 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ATP6V1AP38606 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ATP6V1AP38606 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
ATP6V1AP38606 DRD5P2-201ENST00000421395 2012 ntBASIC31■■■□□ 2.55
ATP6V1AP38606 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ATP6V1AP38606 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31■■■□□ 2.55
ATP6V1AP38606 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31■■■□□ 2.55
ATP6V1AP38606 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31■■■□□ 2.55
ATP6V1AP38606 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
ATP6V1AP38606 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31■■■□□ 2.55
ATP6V1AP38606 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.99■■■□□ 2.55
ATP6V1AP38606 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
ATP6V1AP38606 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP6V1AP38606 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP6V1AP38606 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP6V1AP38606 BX255925.1-201ENST00000566954 1854 ntBASIC30.99■■■□□ 2.55
ATP6V1AP38606 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ATP6V1AP38606 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ATP6V1AP38606 AL139246.5-201ENST00000606645 996 ntBASIC30.98■■■□□ 2.55
ATP6V1AP38606 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
ATP6V1AP38606 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.97■■■□□ 2.55
ATP6V1AP38606 AC131281.2-201ENST00000520478 145 ntBASIC30.97■■■□□ 2.55
ATP6V1AP38606 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.97■■■□□ 2.55
ATP6V1AP38606 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.97■■■□□ 2.55
ATP6V1AP38606 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
ATP6V1AP38606 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.96■■■□□ 2.55
ATP6V1AP38606 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ATP6V1AP38606 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ATP6V1AP38606 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ATP6V1AP38606 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ATP6V1AP38606 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
ATP6V1AP38606 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
ATP6V1AP38606 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
ATP6V1AP38606 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.95■■■□□ 2.55
ATP6V1AP38606 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.95■■■□□ 2.55
ATP6V1AP38606 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.54
ATP6V1AP38606 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ATP6V1AP38606 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ATP6V1AP38606 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms