Protein–RNA interactions for Protein: P07942

LAMB1, Laminin subunit beta-1, humanhuman

Predictions only

Length 1,786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1P07942 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
LAMB1P07942 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.97■■■□□ 2.23
LAMB1P07942 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.97■■■□□ 2.23
LAMB1P07942 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.96■■■□□ 2.23
LAMB1P07942 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
LAMB1P07942 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
LAMB1P07942 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
LAMB1P07942 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.23
LAMB1P07942 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.95■■■□□ 2.22
LAMB1P07942 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
LAMB1P07942 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
LAMB1P07942 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
LAMB1P07942 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
LAMB1P07942 Z92544.1-202ENST00000571933 1220 ntBASIC28.94■■■□□ 2.22
LAMB1P07942 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
LAMB1P07942 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
LAMB1P07942 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
LAMB1P07942 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
LAMB1P07942 AL031848.2-201ENST00000607670 837 ntBASIC28.92■■■□□ 2.22
LAMB1P07942 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
LAMB1P07942 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
LAMB1P07942 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
LAMB1P07942 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
LAMB1P07942 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
LAMB1P07942 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
LAMB1P07942 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.9■■■□□ 2.22
LAMB1P07942 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
LAMB1P07942 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.9■■■□□ 2.22
LAMB1P07942 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.9■■■□□ 2.22
LAMB1P07942 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
LAMB1P07942 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.89■■■□□ 2.22
LAMB1P07942 AC019171.1-201ENST00000601251 1056 ntBASIC28.89■■■□□ 2.22
LAMB1P07942 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
LAMB1P07942 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
LAMB1P07942 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
LAMB1P07942 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
LAMB1P07942 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.88■■■□□ 2.21
LAMB1P07942 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.87■■■□□ 2.21
LAMB1P07942 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.87■■■□□ 2.21
LAMB1P07942 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
LAMB1P07942 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
LAMB1P07942 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.87■■■□□ 2.21
LAMB1P07942 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.86■■■□□ 2.21
LAMB1P07942 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
LAMB1P07942 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.86■■■□□ 2.21
LAMB1P07942 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.86■■■□□ 2.21
LAMB1P07942 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.86■■■□□ 2.21
LAMB1P07942 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.86■■■□□ 2.21
LAMB1P07942 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.86■■■□□ 2.21
LAMB1P07942 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.85■■■□□ 2.21
LAMB1P07942 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.85■■■□□ 2.21
LAMB1P07942 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.85■■■□□ 2.21
LAMB1P07942 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
LAMB1P07942 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
LAMB1P07942 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
LAMB1P07942 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.84■■■□□ 2.21
LAMB1P07942 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.84■■■□□ 2.21
LAMB1P07942 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.84■■■□□ 2.21
LAMB1P07942 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
LAMB1P07942 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
LAMB1P07942 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
LAMB1P07942 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
LAMB1P07942 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
LAMB1P07942 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
LAMB1P07942 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
LAMB1P07942 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
LAMB1P07942 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LAMB1P07942 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.81■■■□□ 2.2
LAMB1P07942 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LAMB1P07942 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
LAMB1P07942 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.8■■■□□ 2.2
LAMB1P07942 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
LAMB1P07942 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
LAMB1P07942 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.79■■■□□ 2.2
LAMB1P07942 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.79■■■□□ 2.2
LAMB1P07942 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
LAMB1P07942 AL121749.1-202ENST00000609313 2153 ntBASIC28.79■■■□□ 2.2
LAMB1P07942 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.79■■■□□ 2.2
LAMB1P07942 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.79■■■□□ 2.2
LAMB1P07942 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
LAMB1P07942 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LAMB1P07942 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.78■■■□□ 2.2
LAMB1P07942 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.78■■■□□ 2.2
LAMB1P07942 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LAMB1P07942 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.78■■■□□ 2.2
LAMB1P07942 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.78■■■□□ 2.2
LAMB1P07942 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LAMB1P07942 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
LAMB1P07942 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
LAMB1P07942 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
LAMB1P07942 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
LAMB1P07942 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
LAMB1P07942 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms