Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
MMP20O60882 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
MMP20O60882 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MMP20O60882 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.05■■□□□ 1.44
MMP20O60882 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.05■■□□□ 1.44
MMP20O60882 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MMP20O60882 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
MMP20O60882 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
MMP20O60882 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
MMP20O60882 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
MMP20O60882 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
MMP20O60882 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MMP20O60882 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
MMP20O60882 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.03■■□□□ 1.44
MMP20O60882 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MMP20O60882 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.03■■□□□ 1.44
MMP20O60882 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MMP20O60882 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MMP20O60882 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
MMP20O60882 AL121749.1-202ENST00000609313 2153 ntBASIC24.02■■□□□ 1.44
MMP20O60882 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MMP20O60882 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
MMP20O60882 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
MMP20O60882 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MMP20O60882 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.02■■□□□ 1.44
MMP20O60882 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.01■■□□□ 1.43
MMP20O60882 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
MMP20O60882 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MMP20O60882 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MMP20O60882 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.01■■□□□ 1.43
MMP20O60882 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.01■■□□□ 1.43
MMP20O60882 AC103834.1-201ENST00000520383 144 ntBASIC24.01■■□□□ 1.43
MMP20O60882 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MMP20O60882 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MMP20O60882 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
MMP20O60882 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
MMP20O60882 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24■■□□□ 1.43
MMP20O60882 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24■■□□□ 1.43
MMP20O60882 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
MMP20O60882 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
MMP20O60882 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.99■■□□□ 1.43
MMP20O60882 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.99■■□□□ 1.43
MMP20O60882 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
MMP20O60882 KRT18P10-201ENST00000388836 1287 ntBASIC23.99■■□□□ 1.43
MMP20O60882 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MMP20O60882 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MMP20O60882 YBX1P4-201ENST00000392794 808 ntBASIC23.98■■□□□ 1.43
MMP20O60882 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.98■■□□□ 1.43
MMP20O60882 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.98■■□□□ 1.43
MMP20O60882 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
MMP20O60882 LONRF2P2-201ENST00000439212 571 ntBASIC23.97■■□□□ 1.43
MMP20O60882 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.97■■□□□ 1.43
MMP20O60882 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.97■■□□□ 1.43
MMP20O60882 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
MMP20O60882 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
MMP20O60882 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
MMP20O60882 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP20O60882 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP20O60882 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP20O60882 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP20O60882 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.96■■□□□ 1.43
MMP20O60882 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
MMP20O60882 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
MMP20O60882 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MMP20O60882 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MMP20O60882 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
MMP20O60882 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
MMP20O60882 AC019171.1-201ENST00000601251 1056 ntBASIC23.94■■□□□ 1.42
MMP20O60882 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MMP20O60882 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MMP20O60882 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMP20O60882 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.93■■□□□ 1.42
MMP20O60882 MIR4508-201ENST00000584178 70 ntBASIC23.93■■□□□ 1.42
MMP20O60882 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMP20O60882 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MMP20O60882 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
MMP20O60882 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MMP20O60882 AL451085.2-201ENST00000605085 799 ntBASIC23.92■■□□□ 1.42
MMP20O60882 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MMP20O60882 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.91■■□□□ 1.42
MMP20O60882 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
MMP20O60882 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.91■■□□□ 1.42
MMP20O60882 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MMP20O60882 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.91■■□□□ 1.42
MMP20O60882 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.9■■□□□ 1.42
MMP20O60882 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MMP20O60882 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MMP20O60882 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.9■■□□□ 1.42
MMP20O60882 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MMP20O60882 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
MMP20O60882 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms