Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.05■■■□□ 2.4
GRIN3BO60391 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
GRIN3BO60391 AL031432.3-201ENST00000607698 485 ntBASIC30.05■■■□□ 2.4
GRIN3BO60391 MIR6821-201ENST00000617625 74 ntBASIC30.05■■■□□ 2.4
GRIN3BO60391 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
GRIN3BO60391 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
GRIN3BO60391 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.04■■■□□ 2.4
GRIN3BO60391 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
GRIN3BO60391 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.03■■■□□ 2.4
GRIN3BO60391 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.03■■■□□ 2.4
GRIN3BO60391 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
GRIN3BO60391 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.03■■■□□ 2.4
GRIN3BO60391 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
GRIN3BO60391 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.02■■■□□ 2.4
GRIN3BO60391 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
GRIN3BO60391 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.02■■■□□ 2.4
GRIN3BO60391 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.02■■■□□ 2.4
GRIN3BO60391 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.02■■■□□ 2.4
GRIN3BO60391 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.01■■■□□ 2.39
GRIN3BO60391 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.01■■■□□ 2.39
GRIN3BO60391 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
GRIN3BO60391 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
GRIN3BO60391 WHAMMP3-201ENST00000611636 1609 ntBASIC30■■■□□ 2.39
GRIN3BO60391 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30■■■□□ 2.39
GRIN3BO60391 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
GRIN3BO60391 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30■■■□□ 2.39
GRIN3BO60391 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30■■■□□ 2.39
GRIN3BO60391 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.99■■■□□ 2.39
GRIN3BO60391 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.99■■■□□ 2.39
GRIN3BO60391 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.99■■■□□ 2.39
GRIN3BO60391 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
GRIN3BO60391 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
GRIN3BO60391 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
GRIN3BO60391 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
GRIN3BO60391 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
GRIN3BO60391 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.98■■■□□ 2.39
GRIN3BO60391 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.98■■■□□ 2.39
GRIN3BO60391 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
GRIN3BO60391 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
GRIN3BO60391 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
GRIN3BO60391 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
GRIN3BO60391 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
GRIN3BO60391 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
GRIN3BO60391 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.96■■■□□ 2.39
GRIN3BO60391 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
GRIN3BO60391 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.95■■■□□ 2.39
GRIN3BO60391 UNC93B3-201ENST00000308076 687 ntBASIC29.95■■■□□ 2.39
GRIN3BO60391 AC097381.1-201ENST00000429019 1296 ntBASIC29.95■■■□□ 2.39
GRIN3BO60391 AL162430.1-201ENST00000480705 870 ntBASIC29.95■■■□□ 2.39
GRIN3BO60391 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.95■■■□□ 2.39
GRIN3BO60391 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.95■■■□□ 2.38
GRIN3BO60391 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.94■■■□□ 2.38
GRIN3BO60391 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
GRIN3BO60391 EDA-201ENST00000338901 1233 ntBASIC29.93■■■□□ 2.38
GRIN3BO60391 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
GRIN3BO60391 AL355001.2-201ENST00000620617 1191 ntBASIC29.93■■■□□ 2.38
GRIN3BO60391 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.93■■■□□ 2.38
GRIN3BO60391 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.92■■■□□ 2.38
GRIN3BO60391 AC105265.2-201ENST00000467189 838 ntBASIC29.92■■■□□ 2.38
GRIN3BO60391 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.92■■■□□ 2.38
GRIN3BO60391 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.91■■■□□ 2.38
GRIN3BO60391 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
GRIN3BO60391 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC29.91■■■□□ 2.38
GRIN3BO60391 MIR4281-201ENST00000580852 62 ntBASIC29.91■■■□□ 2.38
GRIN3BO60391 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.91■■■□□ 2.38
GRIN3BO60391 AL136162.1-201ENST00000607711 1078 ntBASIC29.91■■■□□ 2.38
GRIN3BO60391 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
GRIN3BO60391 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC29.91■■■□□ 2.38
GRIN3BO60391 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
GRIN3BO60391 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.9■■■□□ 2.38
GRIN3BO60391 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
GRIN3BO60391 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.89■■■□□ 2.38
GRIN3BO60391 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
GRIN3BO60391 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
GRIN3BO60391 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
GRIN3BO60391 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
GRIN3BO60391 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.86■■■□□ 2.37
GRIN3BO60391 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.86■■■□□ 2.37
GRIN3BO60391 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
GRIN3BO60391 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.85■■■□□ 2.37
GRIN3BO60391 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
GRIN3BO60391 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
GRIN3BO60391 AC090192.1-201ENST00000517740 490 ntBASIC29.85■■■□□ 2.37
GRIN3BO60391 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
GRIN3BO60391 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
GRIN3BO60391 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
GRIN3BO60391 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.84■■■□□ 2.37
GRIN3BO60391 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
GRIN3BO60391 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
GRIN3BO60391 AC087623.3-201ENST00000607047 1098 ntBASIC29.84■■■□□ 2.37
GRIN3BO60391 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.84■■■□□ 2.37
GRIN3BO60391 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.84■■■□□ 2.37
GRIN3BO60391 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
GRIN3BO60391 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
GRIN3BO60391 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.83■■■□□ 2.37
GRIN3BO60391 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.83■■■□□ 2.37
GRIN3BO60391 RARRES2P11-201ENST00000635158 484 ntBASIC29.83■■■□□ 2.37
GRIN3BO60391 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
GRIN3BO60391 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.82■■■□□ 2.36
GRIN3BO60391 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms