Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.16■□□□□ 0.66
CGB1A6NKQ9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.15■□□□□ 0.66
CGB1A6NKQ9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CGB1A6NKQ9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CGB1A6NKQ9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CGB1A6NKQ9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CGB1A6NKQ9 AC025884.2-201ENST00000553429 711 ntBASIC19.13■□□□□ 0.65
CGB1A6NKQ9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.13■□□□□ 0.65
CGB1A6NKQ9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CGB1A6NKQ9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CGB1A6NKQ9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.13■□□□□ 0.65
CGB1A6NKQ9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CGB1A6NKQ9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CGB1A6NKQ9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CGB1A6NKQ9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
CGB1A6NKQ9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CGB1A6NKQ9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CGB1A6NKQ9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.12■□□□□ 0.65
CGB1A6NKQ9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CGB1A6NKQ9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CGB1A6NKQ9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.1■□□□□ 0.65
CGB1A6NKQ9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CGB1A6NKQ9 AC092296.2-201ENST00000589470 999 ntBASIC19.1■□□□□ 0.65
CGB1A6NKQ9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CGB1A6NKQ9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CGB1A6NKQ9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CGB1A6NKQ9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CGB1A6NKQ9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CGB1A6NKQ9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.08■□□□□ 0.65
CGB1A6NKQ9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CGB1A6NKQ9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CGB1A6NKQ9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.08■□□□□ 0.64
CGB1A6NKQ9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CGB1A6NKQ9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CGB1A6NKQ9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.08■□□□□ 0.64
CGB1A6NKQ9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CGB1A6NKQ9 AC022211.4-201ENST00000625094 2161 ntBASIC19.08■□□□□ 0.64
CGB1A6NKQ9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CGB1A6NKQ9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CGB1A6NKQ9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.06■□□□□ 0.64
CGB1A6NKQ9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CGB1A6NKQ9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.06■□□□□ 0.64
CGB1A6NKQ9 AC142381.3-201ENST00000568208 1670 ntBASIC19.06■□□□□ 0.64
CGB1A6NKQ9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.06■□□□□ 0.64
CGB1A6NKQ9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CGB1A6NKQ9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CGB1A6NKQ9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CGB1A6NKQ9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CGB1A6NKQ9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms