Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-1A0A0K0K1A3 AC022211.4-201ENST00000625094 2161 ntBASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-1A0A0K0K1A3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-1A0A0K0K1A3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-1A0A0K0K1A3 AC097639.1-201ENST00000565519 1891 ntBASIC16.91■□□□□ 0.3
TRBV10-1A0A0K0K1A3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-1A0A0K0K1A3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV10-1A0A0K0K1A3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-1A0A0K0K1A3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-1A0A0K0K1A3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 MIR3960-201ENST00000583311 91 ntBASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV10-1A0A0K0K1A3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV10-1A0A0K0K1A3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-1A0A0K0K1A3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV10-1A0A0K0K1A3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AC025884.2-201ENST00000553429 711 ntBASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV10-1A0A0K0K1A3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV10-1A0A0K0K1A3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AL157400.5-201ENST00000507624 621 ntBASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AC060814.1-201ENST00000554326 538 ntBASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AC093323.1-202ENST00000635031 2045 ntBASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AP003733.4-201ENST00000623785 1697 ntBASIC16.85■□□□□ 0.29
TRBV10-1A0A0K0K1A3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRBV10-1A0A0K0K1A3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV10-1A0A0K0K1A3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV10-1A0A0K0K1A3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV10-1A0A0K0K1A3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV10-1A0A0K0K1A3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV10-1A0A0K0K1A3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms