Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TBC1D3DA0A087WVF3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TBC1D3DA0A087WVF3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TBC1D3DA0A087WVF3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TBC1D3DA0A087WVF3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
TBC1D3DA0A087WVF3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D3DA0A087WVF3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.07■■□□□ 1.44
TBC1D3DA0A087WVF3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
TBC1D3DA0A087WVF3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.07■■□□□ 1.44
TBC1D3DA0A087WVF3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D3DA0A087WVF3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.07■■□□□ 1.44
TBC1D3DA0A087WVF3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TBC1D3DA0A087WVF3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TBC1D3DA0A087WVF3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TBC1D3DA0A087WVF3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.06■■□□□ 1.44
TBC1D3DA0A087WVF3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TBC1D3DA0A087WVF3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.06■■□□□ 1.44
TBC1D3DA0A087WVF3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.05■■□□□ 1.44
TBC1D3DA0A087WVF3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D3DA0A087WVF3 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.04■■□□□ 1.44
TBC1D3DA0A087WVF3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.04■■□□□ 1.44
TBC1D3DA0A087WVF3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D3DA0A087WVF3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TBC1D3DA0A087WVF3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TBC1D3DA0A087WVF3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TBC1D3DA0A087WVF3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
TBC1D3DA0A087WVF3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.02■■□□□ 1.44
TBC1D3DA0A087WVF3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TBC1D3DA0A087WVF3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.02■■□□□ 1.44
TBC1D3DA0A087WVF3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
TBC1D3DA0A087WVF3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.02■■□□□ 1.44
TBC1D3DA0A087WVF3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D3DA0A087WVF3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D3DA0A087WVF3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TBC1D3DA0A087WVF3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 OR2A1-AS1-204ENST00000470435 602 ntBASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TBC1D3DA0A087WVF3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D3DA0A087WVF3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.99■■□□□ 1.43
TBC1D3DA0A087WVF3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.99■■□□□ 1.43
TBC1D3DA0A087WVF3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.99■■□□□ 1.43
TBC1D3DA0A087WVF3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D3DA0A087WVF3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D3DA0A087WVF3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D3DA0A087WVF3 AC022616.5-201ENST00000518796 181 ntBASIC23.98■■□□□ 1.43
TBC1D3DA0A087WVF3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.98■■□□□ 1.43
TBC1D3DA0A087WVF3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TBC1D3DA0A087WVF3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.98■■□□□ 1.43
TBC1D3DA0A087WVF3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TBC1D3DA0A087WVF3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TBC1D3DA0A087WVF3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TBC1D3DA0A087WVF3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.97■■□□□ 1.43
TBC1D3DA0A087WVF3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TBC1D3DA0A087WVF3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D3DA0A087WVF3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TBC1D3DA0A087WVF3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TBC1D3DA0A087WVF3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.96■■□□□ 1.43
TBC1D3DA0A087WVF3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
TBC1D3DA0A087WVF3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D3DA0A087WVF3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TBC1D3DA0A087WVF3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 GUSBP5-201ENST00000418136 578 ntBASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 AC239859.2-201ENST00000444165 318 ntBASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D3DA0A087WVF3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D3DA0A087WVF3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D3DA0A087WVF3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D3DA0A087WVF3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.94■■□□□ 1.42
TBC1D3DA0A087WVF3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TBC1D3DA0A087WVF3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D3DA0A087WVF3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D3DA0A087WVF3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D3DA0A087WVF3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D3DA0A087WVF3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.92■■□□□ 1.42
TBC1D3DA0A087WVF3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TBC1D3DA0A087WVF3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.92■■□□□ 1.42
TBC1D3DA0A087WVF3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TBC1D3DA0A087WVF3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D3DA0A087WVF3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D3DA0A087WVF3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
TBC1D3DA0A087WVF3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms