Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AL157400.5-201ENST00000507624 621 ntBASIC28.73■■■□□ 2.19
CYP46A1Q9Y6A2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.73■■■□□ 2.19
CYP46A1Q9Y6A2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CYP46A1Q9Y6A2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CYP46A1Q9Y6A2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CYP46A1Q9Y6A2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.72■■■□□ 2.19
CYP46A1Q9Y6A2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CYP46A1Q9Y6A2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CYP46A1Q9Y6A2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
CYP46A1Q9Y6A2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CYP46A1Q9Y6A2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CYP46A1Q9Y6A2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CYP46A1Q9Y6A2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
CYP46A1Q9Y6A2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
CYP46A1Q9Y6A2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CYP46A1Q9Y6A2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.7■■■□□ 2.18
CYP46A1Q9Y6A2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.7■■■□□ 2.18
CYP46A1Q9Y6A2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CYP46A1Q9Y6A2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.7■■■□□ 2.18
CYP46A1Q9Y6A2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
CYP46A1Q9Y6A2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CYP46A1Q9Y6A2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.69■■■□□ 2.18
CYP46A1Q9Y6A2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.69■■■□□ 2.18
CYP46A1Q9Y6A2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CYP46A1Q9Y6A2 AC096887.2-201ENST00000623443 1957 ntBASIC28.69■■■□□ 2.18
CYP46A1Q9Y6A2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CYP46A1Q9Y6A2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.68■■■□□ 2.18
CYP46A1Q9Y6A2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CYP46A1Q9Y6A2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CYP46A1Q9Y6A2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CYP46A1Q9Y6A2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.66■■■□□ 2.18
CYP46A1Q9Y6A2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.66■■■□□ 2.18
CYP46A1Q9Y6A2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.66■■■□□ 2.18
CYP46A1Q9Y6A2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CYP46A1Q9Y6A2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.66■■■□□ 2.18
CYP46A1Q9Y6A2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CYP46A1Q9Y6A2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.65■■■□□ 2.18
CYP46A1Q9Y6A2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CYP46A1Q9Y6A2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
CYP46A1Q9Y6A2 AC025884.2-201ENST00000553429 711 ntBASIC28.64■■■□□ 2.18
CYP46A1Q9Y6A2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.64■■■□□ 2.18
CYP46A1Q9Y6A2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.64■■■□□ 2.17
CYP46A1Q9Y6A2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.64■■■□□ 2.17
CYP46A1Q9Y6A2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.63■■■□□ 2.17
CYP46A1Q9Y6A2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CYP46A1Q9Y6A2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CYP46A1Q9Y6A2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.63■■■□□ 2.17
CYP46A1Q9Y6A2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.63■■■□□ 2.17
CYP46A1Q9Y6A2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CYP46A1Q9Y6A2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CYP46A1Q9Y6A2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.62■■■□□ 2.17
CYP46A1Q9Y6A2 AC092296.2-201ENST00000589470 999 ntBASIC28.62■■■□□ 2.17
CYP46A1Q9Y6A2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.62■■■□□ 2.17
CYP46A1Q9Y6A2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CYP46A1Q9Y6A2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CYP46A1Q9Y6A2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
CYP46A1Q9Y6A2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.6■■■□□ 2.17
CYP46A1Q9Y6A2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CYP46A1Q9Y6A2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CYP46A1Q9Y6A2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
CYP46A1Q9Y6A2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CYP46A1Q9Y6A2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.59■■■□□ 2.17
CYP46A1Q9Y6A2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.59■■■□□ 2.17
CYP46A1Q9Y6A2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
CYP46A1Q9Y6A2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 AC022413.1-201ENST00000624602 984 ntBASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 SMPD5-203ENST00000639008 1464 ntBASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CYP46A1Q9Y6A2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CYP46A1Q9Y6A2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CYP46A1Q9Y6A2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CYP46A1Q9Y6A2 AC135731.1-201ENST00000569415 2548 ntBASIC28.57■■■□□ 2.16
CYP46A1Q9Y6A2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CYP46A1Q9Y6A2 MIR4449-201ENST00000578365 66 ntBASIC28.56■■■□□ 2.16
CYP46A1Q9Y6A2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.56■■■□□ 2.16
CYP46A1Q9Y6A2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 MIR3960-201ENST00000583311 91 ntBASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CYP46A1Q9Y6A2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CYP46A1Q9Y6A2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.54■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms