Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC097358.2-201ENST00000607541 1159 ntBASIC19.67■□□□□ 0.74
RCL1Q9Y2P8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCL1Q9Y2P8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCL1Q9Y2P8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 AC005559.1-201ENST00000589661 871 ntBASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
RCL1Q9Y2P8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RCL1Q9Y2P8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RCL1Q9Y2P8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RCL1Q9Y2P8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RCL1Q9Y2P8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.64■□□□□ 0.73
RCL1Q9Y2P8 AC110285.7-201ENST00000624417 1536 ntBASIC19.64■□□□□ 0.73
RCL1Q9Y2P8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCL1Q9Y2P8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCL1Q9Y2P8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCL1Q9Y2P8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.63■□□□□ 0.73
RCL1Q9Y2P8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
RCL1Q9Y2P8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCL1Q9Y2P8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCL1Q9Y2P8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCL1Q9Y2P8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCL1Q9Y2P8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCL1Q9Y2P8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCL1Q9Y2P8 AC096887.2-201ENST00000623443 1957 ntBASIC19.61■□□□□ 0.73
RCL1Q9Y2P8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RCL1Q9Y2P8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.61■□□□□ 0.73
RCL1Q9Y2P8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCL1Q9Y2P8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCL1Q9Y2P8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 AC012676.1-201ENST00000574705 1949 ntBASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCL1Q9Y2P8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCL1Q9Y2P8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.59■□□□□ 0.73
RCL1Q9Y2P8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RCL1Q9Y2P8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.58■□□□□ 0.73
RCL1Q9Y2P8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.58■□□□□ 0.73
RCL1Q9Y2P8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RCL1Q9Y2P8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.58■□□□□ 0.72
RCL1Q9Y2P8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.58■□□□□ 0.72
RCL1Q9Y2P8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RCL1Q9Y2P8 LINC01124-201ENST00000409786 2117 ntBASIC19.58■□□□□ 0.72
RCL1Q9Y2P8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RCL1Q9Y2P8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCL1Q9Y2P8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RCL1Q9Y2P8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.57■□□□□ 0.72
RCL1Q9Y2P8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RCL1Q9Y2P8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.57■□□□□ 0.72
RCL1Q9Y2P8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCL1Q9Y2P8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCL1Q9Y2P8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RCL1Q9Y2P8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RCL1Q9Y2P8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RCL1Q9Y2P8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RCL1Q9Y2P8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RCL1Q9Y2P8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms