Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
EFCC1Q9HA90 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
EFCC1Q9HA90 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
EFCC1Q9HA90 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
EFCC1Q9HA90 LONRF2P2-201ENST00000439212 571 ntBASIC28.28■■■□□ 2.12
EFCC1Q9HA90 AC087393.1-201ENST00000582896 145 ntBASIC28.28■■■□□ 2.12
EFCC1Q9HA90 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.28■■■□□ 2.12
EFCC1Q9HA90 AL139246.5-201ENST00000606645 996 ntBASIC28.28■■■□□ 2.12
EFCC1Q9HA90 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
EFCC1Q9HA90 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EFCC1Q9HA90 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
EFCC1Q9HA90 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.26■■■□□ 2.11
EFCC1Q9HA90 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.26■■■□□ 2.11
EFCC1Q9HA90 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
EFCC1Q9HA90 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
EFCC1Q9HA90 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
EFCC1Q9HA90 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
EFCC1Q9HA90 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.25■■■□□ 2.11
EFCC1Q9HA90 UNC93B8-201ENST00000511903 705 ntBASIC28.25■■■□□ 2.11
EFCC1Q9HA90 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.25■■■□□ 2.11
EFCC1Q9HA90 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.25■■■□□ 2.11
EFCC1Q9HA90 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
EFCC1Q9HA90 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.24■■■□□ 2.11
EFCC1Q9HA90 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
EFCC1Q9HA90 BX664725.1-201ENST00000438252 379 ntBASIC28.24■■■□□ 2.11
EFCC1Q9HA90 KRT16P3-201ENST00000439127 1283 ntBASIC28.24■■■□□ 2.11
EFCC1Q9HA90 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.24■■■□□ 2.11
EFCC1Q9HA90 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.24■■■□□ 2.11
EFCC1Q9HA90 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
EFCC1Q9HA90 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.23■■■□□ 2.11
EFCC1Q9HA90 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
EFCC1Q9HA90 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.23■■■□□ 2.11
EFCC1Q9HA90 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
EFCC1Q9HA90 WHAMMP3-201ENST00000611636 1609 ntBASIC28.22■■■□□ 2.11
EFCC1Q9HA90 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
EFCC1Q9HA90 ABCB10P1-201ENST00000614297 2181 ntBASIC28.21■■■□□ 2.11
EFCC1Q9HA90 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.21■■■□□ 2.11
EFCC1Q9HA90 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
EFCC1Q9HA90 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
EFCC1Q9HA90 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
EFCC1Q9HA90 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
EFCC1Q9HA90 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
EFCC1Q9HA90 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
EFCC1Q9HA90 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
EFCC1Q9HA90 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
EFCC1Q9HA90 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
EFCC1Q9HA90 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
EFCC1Q9HA90 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
EFCC1Q9HA90 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.16■■■□□ 2.1
EFCC1Q9HA90 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
EFCC1Q9HA90 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
EFCC1Q9HA90 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.16■■■□□ 2.1
EFCC1Q9HA90 RPS2P7-201ENST00000447334 885 ntBASIC28.15■■■□□ 2.1
EFCC1Q9HA90 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
EFCC1Q9HA90 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.15■■■□□ 2.1
EFCC1Q9HA90 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.15■■■□□ 2.1
EFCC1Q9HA90 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
EFCC1Q9HA90 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
EFCC1Q9HA90 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
EFCC1Q9HA90 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
EFCC1Q9HA90 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
EFCC1Q9HA90 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
EFCC1Q9HA90 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
EFCC1Q9HA90 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
EFCC1Q9HA90 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
EFCC1Q9HA90 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
EFCC1Q9HA90 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
EFCC1Q9HA90 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
EFCC1Q9HA90 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
EFCC1Q9HA90 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
EFCC1Q9HA90 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
EFCC1Q9HA90 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.11■■■□□ 2.09
EFCC1Q9HA90 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.11■■■□□ 2.09
EFCC1Q9HA90 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
EFCC1Q9HA90 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
EFCC1Q9HA90 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms