Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.8■□□□□ 0.92
SPG11Q96JI7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPG11Q96JI7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.8■□□□□ 0.92
SPG11Q96JI7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPG11Q96JI7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SPG11Q96JI7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPG11Q96JI7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPG11Q96JI7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPG11Q96JI7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SPG11Q96JI7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SPG11Q96JI7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPG11Q96JI7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPG11Q96JI7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SPG11Q96JI7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPG11Q96JI7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.79■□□□□ 0.92
SPG11Q96JI7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPG11Q96JI7 AC005837.3-201ENST00000612163 286 ntBASIC20.78■□□□□ 0.92
SPG11Q96JI7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.78■□□□□ 0.92
SPG11Q96JI7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPG11Q96JI7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPG11Q96JI7 MIR3621-201ENST00000580529 85 ntBASIC20.78■□□□□ 0.92
SPG11Q96JI7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPG11Q96JI7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPG11Q96JI7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPG11Q96JI7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPG11Q96JI7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.77■□□□□ 0.92
SPG11Q96JI7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPG11Q96JI7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.76■□□□□ 0.91
SPG11Q96JI7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPG11Q96JI7 KRT18P24-201ENST00000344739 1156 ntBASIC20.76■□□□□ 0.91
SPG11Q96JI7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SPG11Q96JI7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPG11Q96JI7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPG11Q96JI7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPG11Q96JI7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPG11Q96JI7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPG11Q96JI7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPG11Q96JI7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.74■□□□□ 0.91
SPG11Q96JI7 AC092666.2-201ENST00000613287 246 ntBASIC20.74■□□□□ 0.91
SPG11Q96JI7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPG11Q96JI7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPG11Q96JI7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPG11Q96JI7 AC092028.1-203ENST00000608262 953 ntBASIC20.74■□□□□ 0.91
SPG11Q96JI7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPG11Q96JI7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
SPG11Q96JI7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPG11Q96JI7 AC137630.3-201ENST00000607245 391 ntBASIC20.73■□□□□ 0.91
SPG11Q96JI7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPG11Q96JI7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPG11Q96JI7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPG11Q96JI7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.73■□□□□ 0.91
SPG11Q96JI7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.73■□□□□ 0.91
SPG11Q96JI7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.73■□□□□ 0.91
SPG11Q96JI7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPG11Q96JI7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SPG11Q96JI7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.71■□□□□ 0.91
SPG11Q96JI7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPG11Q96JI7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SPG11Q96JI7 MIR4466-201ENST00000606121 54 ntBASIC20.7■□□□□ 0.91
SPG11Q96JI7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SPG11Q96JI7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPG11Q96JI7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPG11Q96JI7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPG11Q96JI7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPG11Q96JI7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPG11Q96JI7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPG11Q96JI7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.69■□□□□ 0.9
SPG11Q96JI7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SPG11Q96JI7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
SPG11Q96JI7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPG11Q96JI7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPG11Q96JI7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SPG11Q96JI7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPG11Q96JI7 AC026271.2-201ENST00000428091 497 ntBASIC20.68■□□□□ 0.9
SPG11Q96JI7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.68■□□□□ 0.9
SPG11Q96JI7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPG11Q96JI7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPG11Q96JI7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.68■□□□□ 0.9
SPG11Q96JI7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.68■□□□□ 0.9
SPG11Q96JI7 ABCB10P1-201ENST00000614297 2181 ntBASIC20.68■□□□□ 0.9
SPG11Q96JI7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.68■□□□□ 0.9
SPG11Q96JI7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPG11Q96JI7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPG11Q96JI7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPG11Q96JI7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.67■□□□□ 0.9
SPG11Q96JI7 AC021242.3-201ENST00000607598 1377 ntBASIC20.67■□□□□ 0.9
SPG11Q96JI7 TSPY9P-201ENST00000440215 945 ntBASIC20.67■□□□□ 0.9
SPG11Q96JI7 TSPY11P-201ENST00000442607 1045 ntBASIC20.67■□□□□ 0.9
SPG11Q96JI7 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.67■□□□□ 0.9
SPG11Q96JI7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPG11Q96JI7 ZNRF2P3-201ENST00000424200 374 ntBASIC20.66■□□□□ 0.9
SPG11Q96JI7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.66■□□□□ 0.9
SPG11Q96JI7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms