Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.9■■□□□ 1.74
DDX1Q92499 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX1Q92499 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.9■■□□□ 1.74
DDX1Q92499 AC092296.2-201ENST00000589470 999 ntBASIC25.9■■□□□ 1.74
DDX1Q92499 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX1Q92499 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX1Q92499 AC010501.1-201ENST00000606270 1962 ntBASIC25.89■■□□□ 1.74
DDX1Q92499 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.89■■□□□ 1.74
DDX1Q92499 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
DDX1Q92499 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX1Q92499 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.89■■□□□ 1.73
DDX1Q92499 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX1Q92499 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
DDX1Q92499 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX1Q92499 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX1Q92499 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX1Q92499 AC025884.2-201ENST00000553429 711 ntBASIC25.88■■□□□ 1.73
DDX1Q92499 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX1Q92499 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX1Q92499 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX1Q92499 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.86■■□□□ 1.73
DDX1Q92499 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX1Q92499 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX1Q92499 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX1Q92499 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX1Q92499 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX1Q92499 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX1Q92499 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX1Q92499 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
DDX1Q92499 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX1Q92499 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX1Q92499 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX1Q92499 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.84■■□□□ 1.73
DDX1Q92499 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
DDX1Q92499 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX1Q92499 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX1Q92499 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX1Q92499 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX1Q92499 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.83■■□□□ 1.73
DDX1Q92499 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
DDX1Q92499 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
DDX1Q92499 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX1Q92499 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX1Q92499 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
DDX1Q92499 AC022413.1-201ENST00000624602 984 ntBASIC25.82■■□□□ 1.72
DDX1Q92499 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX1Q92499 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX1Q92499 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX1Q92499 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX1Q92499 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX1Q92499 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
DDX1Q92499 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX1Q92499 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX1Q92499 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.81■■□□□ 1.72
DDX1Q92499 AC096887.2-201ENST00000623443 1957 ntBASIC25.81■■□□□ 1.72
DDX1Q92499 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX1Q92499 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX1Q92499 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
DDX1Q92499 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
DDX1Q92499 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.8■■□□□ 1.72
DDX1Q92499 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX1Q92499 AC020928.2-201ENST00000588717 2197 ntBASIC25.8■■□□□ 1.72
DDX1Q92499 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX1Q92499 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.79■■□□□ 1.72
DDX1Q92499 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
DDX1Q92499 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.79■■□□□ 1.72
DDX1Q92499 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX1Q92499 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
DDX1Q92499 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
DDX1Q92499 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX1Q92499 ECEL1P2-201ENST00000461596 1295 ntBASIC25.77■■□□□ 1.72
DDX1Q92499 AL033527.3-201ENST00000566366 1196 ntBASIC25.77■■□□□ 1.72
DDX1Q92499 SMPD5-203ENST00000639008 1464 ntBASIC25.77■■□□□ 1.72
DDX1Q92499 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
DDX1Q92499 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX1Q92499 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX1Q92499 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX1Q92499 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.74■■□□□ 1.71
DDX1Q92499 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX1Q92499 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
DDX1Q92499 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.74■■□□□ 1.71
DDX1Q92499 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX1Q92499 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX1Q92499 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DDX1Q92499 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
DDX1Q92499 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX1Q92499 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.73■■□□□ 1.71
DDX1Q92499 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX1Q92499 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.73■■□□□ 1.71
DDX1Q92499 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
DDX1Q92499 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
DDX1Q92499 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX1Q92499 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX1Q92499 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.71■■□□□ 1.71
DDX1Q92499 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX1Q92499 MIR3960-201ENST00000583311 91 ntBASIC25.71■■□□□ 1.71
DDX1Q92499 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.7■■□□□ 1.7
DDX1Q92499 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.7■■□□□ 1.7
DDX1Q92499 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX1Q92499 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms