Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH19Q8TAB3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDH19Q8TAB3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH19Q8TAB3 GPX1-201ENST00000419349 1106 ntBASIC25.05■■□□□ 1.6
PCDH19Q8TAB3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDH19Q8TAB3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH19Q8TAB3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH19Q8TAB3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 SMPD5-203ENST00000639008 1464 ntBASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 ECEL1P2-201ENST00000461596 1295 ntBASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH19Q8TAB3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
PCDH19Q8TAB3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDH19Q8TAB3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH19Q8TAB3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.02■■□□□ 1.6
PCDH19Q8TAB3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH19Q8TAB3 RARRES2P2-201ENST00000394842 485 ntBASIC25.01■■□□□ 1.59
PCDH19Q8TAB3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH19Q8TAB3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH19Q8TAB3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25■■□□□ 1.59
PCDH19Q8TAB3 AC096887.2-201ENST00000623443 1957 ntBASIC25■■□□□ 1.59
PCDH19Q8TAB3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25■■□□□ 1.59
PCDH19Q8TAB3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH19Q8TAB3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH19Q8TAB3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PCDH19Q8TAB3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH19Q8TAB3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH19Q8TAB3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDH19Q8TAB3 AC020928.2-201ENST00000588717 2197 ntBASIC24.99■■□□□ 1.59
PCDH19Q8TAB3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
PCDH19Q8TAB3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDH19Q8TAB3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH19Q8TAB3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH19Q8TAB3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDH19Q8TAB3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDH19Q8TAB3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
PCDH19Q8TAB3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDH19Q8TAB3 MIR3960-201ENST00000583311 91 ntBASIC24.97■■□□□ 1.59
PCDH19Q8TAB3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PCDH19Q8TAB3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH19Q8TAB3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.96■■□□□ 1.59
PCDH19Q8TAB3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH19Q8TAB3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDH19Q8TAB3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
PCDH19Q8TAB3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH19Q8TAB3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDH19Q8TAB3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDH19Q8TAB3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH19Q8TAB3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDH19Q8TAB3 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDH19Q8TAB3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
PCDH19Q8TAB3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH19Q8TAB3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
PCDH19Q8TAB3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 RNF126P1-201ENST00000567452 1320 ntBASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PCDH19Q8TAB3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PCDH19Q8TAB3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
PCDH19Q8TAB3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDH19Q8TAB3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDH19Q8TAB3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH19Q8TAB3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH19Q8TAB3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.91■■□□□ 1.58
PCDH19Q8TAB3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDH19Q8TAB3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH19Q8TAB3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH19Q8TAB3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH19Q8TAB3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH19Q8TAB3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH19Q8TAB3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH19Q8TAB3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.9■■□□□ 1.58
PCDH19Q8TAB3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDH19Q8TAB3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
PCDH19Q8TAB3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
PCDH19Q8TAB3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.89■■□□□ 1.58
PCDH19Q8TAB3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDH19Q8TAB3 RP9P-202ENST00000450133 1212 ntBASIC24.89■■□□□ 1.58
PCDH19Q8TAB3 AC007029.1-201ENST00000604183 313 ntBASIC24.89■■□□□ 1.58
PCDH19Q8TAB3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms