Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LINC01006Q8NI28 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01006Q8NI28 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 KRT18P10-201ENST00000388836 1287 ntBASIC19.06■□□□□ 0.64
LINC01006Q8NI28 AL356441.2-201ENST00000443009 864 ntBASIC19.06■□□□□ 0.64
LINC01006Q8NI28 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01006Q8NI28 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
LINC01006Q8NI28 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01006Q8NI28 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01006Q8NI28 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC01006Q8NI28 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.05■□□□□ 0.64
LINC01006Q8NI28 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC01006Q8NI28 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01006Q8NI28 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 Z92544.1-202ENST00000571933 1220 ntBASIC19.04■□□□□ 0.64
LINC01006Q8NI28 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LINC01006Q8NI28 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LINC01006Q8NI28 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
LINC01006Q8NI28 AC139426.1-201ENST00000568218 2529 ntBASIC19.02■□□□□ 0.64
LINC01006Q8NI28 LINC01003-201ENST00000564834 1764 ntBASIC19.02■□□□□ 0.64
LINC01006Q8NI28 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC01006Q8NI28 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC01006Q8NI28 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC01006Q8NI28 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.01■□□□□ 0.63
LINC01006Q8NI28 AC022616.5-201ENST00000518796 181 ntBASIC19■□□□□ 0.63
LINC01006Q8NI28 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19■□□□□ 0.63
LINC01006Q8NI28 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LINC01006Q8NI28 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01006Q8NI28 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
LINC01006Q8NI28 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19■□□□□ 0.63
LINC01006Q8NI28 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01006Q8NI28 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01006Q8NI28 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01006Q8NI28 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01006Q8NI28 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01006Q8NI28 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01006Q8NI28 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LINC01006Q8NI28 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01006Q8NI28 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01006Q8NI28 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01006Q8NI28 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01006Q8NI28 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01006Q8NI28 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01006Q8NI28 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01006Q8NI28 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01006Q8NI28 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01006Q8NI28 KRT125P-201ENST00000546827 989 ntBASIC18.96■□□□□ 0.63
LINC01006Q8NI28 BX255925.1-201ENST00000566954 1854 ntBASIC18.96■□□□□ 0.63
LINC01006Q8NI28 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01006Q8NI28 AC019069.1-201ENST00000610008 1333 ntBASIC18.96■□□□□ 0.63
LINC01006Q8NI28 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
LINC01006Q8NI28 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01006Q8NI28 BX664725.1-201ENST00000438252 379 ntBASIC18.95■□□□□ 0.62
LINC01006Q8NI28 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LINC01006Q8NI28 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01006Q8NI28 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01006Q8NI28 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01006Q8NI28 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms