Protein–RNA interactions for Protein: Q8NCQ7

PROCA1, Protein PROCA1, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROCA1Q8NCQ7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PROCA1Q8NCQ7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PROCA1Q8NCQ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.36■■■□□ 2.13
PROCA1Q8NCQ7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC28.36■■■□□ 2.13
PROCA1Q8NCQ7 Z92544.1-202ENST00000571933 1220 ntBASIC28.36■■■□□ 2.13
PROCA1Q8NCQ7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
PROCA1Q8NCQ7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PROCA1Q8NCQ7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PROCA1Q8NCQ7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 AC239859.2-201ENST00000444165 318 ntBASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PROCA1Q8NCQ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PROCA1Q8NCQ7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PROCA1Q8NCQ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
PROCA1Q8NCQ7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PROCA1Q8NCQ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.32■■■□□ 2.12
PROCA1Q8NCQ7 AC019069.1-201ENST00000610008 1333 ntBASIC28.32■■■□□ 2.12
PROCA1Q8NCQ7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
PROCA1Q8NCQ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.31■■■□□ 2.12
PROCA1Q8NCQ7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PROCA1Q8NCQ7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PROCA1Q8NCQ7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PROCA1Q8NCQ7 KRT18P10-201ENST00000388836 1287 ntBASIC28.3■■■□□ 2.12
PROCA1Q8NCQ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PROCA1Q8NCQ7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
PROCA1Q8NCQ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PROCA1Q8NCQ7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.29■■■□□ 2.12
PROCA1Q8NCQ7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PROCA1Q8NCQ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PROCA1Q8NCQ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC28.28■■■□□ 2.12
PROCA1Q8NCQ7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.28■■■□□ 2.12
PROCA1Q8NCQ7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PROCA1Q8NCQ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
PROCA1Q8NCQ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.27■■■□□ 2.12
PROCA1Q8NCQ7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PROCA1Q8NCQ7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PROCA1Q8NCQ7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PROCA1Q8NCQ7 AC022616.5-201ENST00000518796 181 ntBASIC28.26■■■□□ 2.11
PROCA1Q8NCQ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
PROCA1Q8NCQ7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PROCA1Q8NCQ7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.25■■■□□ 2.11
PROCA1Q8NCQ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PROCA1Q8NCQ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.25■■■□□ 2.11
PROCA1Q8NCQ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PROCA1Q8NCQ7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PROCA1Q8NCQ7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PROCA1Q8NCQ7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.24■■■□□ 2.11
PROCA1Q8NCQ7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PROCA1Q8NCQ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.24■■■□□ 2.11
PROCA1Q8NCQ7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PROCA1Q8NCQ7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PROCA1Q8NCQ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
PROCA1Q8NCQ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.23■■■□□ 2.11
PROCA1Q8NCQ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PROCA1Q8NCQ7 AL449106.1-201ENST00000608517 1980 ntBASIC28.22■■■□□ 2.11
PROCA1Q8NCQ7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.22■■■□□ 2.11
PROCA1Q8NCQ7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PROCA1Q8NCQ7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PROCA1Q8NCQ7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
PROCA1Q8NCQ7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.21■■■□□ 2.11
PROCA1Q8NCQ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PROCA1Q8NCQ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PROCA1Q8NCQ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
PROCA1Q8NCQ7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PROCA1Q8NCQ7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.21■■■□□ 2.11
PROCA1Q8NCQ7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
PROCA1Q8NCQ7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PROCA1Q8NCQ7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PROCA1Q8NCQ7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
PROCA1Q8NCQ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
PROCA1Q8NCQ7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PROCA1Q8NCQ7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.19■■■□□ 2.1
PROCA1Q8NCQ7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PROCA1Q8NCQ7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PROCA1Q8NCQ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PROCA1Q8NCQ7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PROCA1Q8NCQ7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.18■■■□□ 2.1
PROCA1Q8NCQ7 KRT125P-201ENST00000546827 989 ntBASIC28.18■■■□□ 2.1
PROCA1Q8NCQ7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PROCA1Q8NCQ7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PROCA1Q8NCQ7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms