Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC36.74■■■■□ 3.47
ABCA6Q8N139 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
ABCA6Q8N139 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC36.73■■■■□ 3.47
ABCA6Q8N139 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC36.73■■■■□ 3.47
ABCA6Q8N139 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
ABCA6Q8N139 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC36.72■■■■□ 3.47
ABCA6Q8N139 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC36.72■■■■□ 3.47
ABCA6Q8N139 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC36.72■■■■□ 3.47
ABCA6Q8N139 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC36.72■■■■□ 3.47
ABCA6Q8N139 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC36.71■■■■□ 3.47
ABCA6Q8N139 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC36.71■■■■□ 3.47
ABCA6Q8N139 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC36.71■■■■□ 3.47
ABCA6Q8N139 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC36.7■■■■□ 3.47
ABCA6Q8N139 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC36.7■■■■□ 3.47
ABCA6Q8N139 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
ABCA6Q8N139 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
ABCA6Q8N139 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC36.7■■■■□ 3.47
ABCA6Q8N139 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC36.7■■■■□ 3.46
ABCA6Q8N139 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC36.69■■■■□ 3.46
ABCA6Q8N139 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
ABCA6Q8N139 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC36.68■■■■□ 3.46
ABCA6Q8N139 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
ABCA6Q8N139 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC36.67■■■■□ 3.46
ABCA6Q8N139 TRIR-202ENST00000588213 841 ntTSL 3 BASIC36.67■■■■□ 3.46
ABCA6Q8N139 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC36.67■■■■□ 3.46
ABCA6Q8N139 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC36.67■■■■□ 3.46
ABCA6Q8N139 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC36.67■■■■□ 3.46
ABCA6Q8N139 AC022616.5-201ENST00000518796 181 ntBASIC36.67■■■■□ 3.46
ABCA6Q8N139 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
ABCA6Q8N139 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
ABCA6Q8N139 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
ABCA6Q8N139 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
ABCA6Q8N139 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
ABCA6Q8N139 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC36.65■■■■□ 3.46
ABCA6Q8N139 RALB-208ENST00000631312 311 ntTSL 5 BASIC36.65■■■■□ 3.46
ABCA6Q8N139 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
ABCA6Q8N139 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC36.63■■■■□ 3.45
ABCA6Q8N139 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
ABCA6Q8N139 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC36.63■■■■□ 3.45
ABCA6Q8N139 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC36.63■■■■□ 3.45
ABCA6Q8N139 AL139246.5-201ENST00000606645 996 ntBASIC36.63■■■■□ 3.45
ABCA6Q8N139 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
ABCA6Q8N139 AC137630.3-201ENST00000607245 391 ntBASIC36.62■■■■□ 3.45
ABCA6Q8N139 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC36.61■■■■□ 3.45
ABCA6Q8N139 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
ABCA6Q8N139 AC021242.3-201ENST00000607598 1377 ntBASIC36.61■■■■□ 3.45
ABCA6Q8N139 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
ABCA6Q8N139 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
ABCA6Q8N139 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
ABCA6Q8N139 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
ABCA6Q8N139 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC36.61■■■■□ 3.45
ABCA6Q8N139 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC36.6■■■■□ 3.45
ABCA6Q8N139 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC36.6■■■■□ 3.45
ABCA6Q8N139 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
ABCA6Q8N139 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
ABCA6Q8N139 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
ABCA6Q8N139 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
ABCA6Q8N139 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC36.59■■■■□ 3.45
ABCA6Q8N139 AC110285.6-201ENST00000617652 491 ntBASIC36.59■■■■□ 3.45
ABCA6Q8N139 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC36.58■■■■□ 3.45
ABCA6Q8N139 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.45
ABCA6Q8N139 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.45
ABCA6Q8N139 KRT18P24-201ENST00000344739 1156 ntBASIC36.57■■■■□ 3.44
ABCA6Q8N139 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC36.57■■■■□ 3.44
ABCA6Q8N139 TSPY9P-201ENST00000440215 945 ntBASIC36.57■■■■□ 3.44
ABCA6Q8N139 TSPY11P-201ENST00000442607 1045 ntBASIC36.57■■■■□ 3.44
ABCA6Q8N139 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC36.57■■■■□ 3.44
ABCA6Q8N139 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
ABCA6Q8N139 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC36.56■■■■□ 3.44
ABCA6Q8N139 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC36.56■■■■□ 3.44
ABCA6Q8N139 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC36.56■■■■□ 3.44
ABCA6Q8N139 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC36.56■■■■□ 3.44
ABCA6Q8N139 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC36.56■■■■□ 3.44
ABCA6Q8N139 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
ABCA6Q8N139 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
ABCA6Q8N139 NALT1-201ENST00000429224 738 ntTSL 5 BASIC36.54■■■■□ 3.44
ABCA6Q8N139 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC36.54■■■■□ 3.44
ABCA6Q8N139 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
ABCA6Q8N139 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
ABCA6Q8N139 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
ABCA6Q8N139 AL117332.1-201ENST00000622628 974 ntBASIC36.53■■■■□ 3.44
ABCA6Q8N139 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC36.53■■■■□ 3.44
ABCA6Q8N139 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
ABCA6Q8N139 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC36.52■■■■□ 3.44
ABCA6Q8N139 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC36.52■■■■□ 3.44
ABCA6Q8N139 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC36.52■■■■□ 3.44
ABCA6Q8N139 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC36.52■■■■□ 3.44
ABCA6Q8N139 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC36.52■■■■□ 3.44
ABCA6Q8N139 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
ABCA6Q8N139 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC36.51■■■■□ 3.43
ABCA6Q8N139 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
ABCA6Q8N139 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC36.5■■■■□ 3.43
ABCA6Q8N139 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC36.5■■■■□ 3.43
ABCA6Q8N139 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC36.49■■■■□ 3.43
ABCA6Q8N139 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
ABCA6Q8N139 MIR4281-201ENST00000580852 62 ntBASIC36.49■■■■□ 3.43
ABCA6Q8N139 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
ABCA6Q8N139 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC36.48■■■■□ 3.43
ABCA6Q8N139 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC36.48■■■■□ 3.43
ABCA6Q8N139 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC36.48■■■■□ 3.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms