Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC40.57■■■■■ 4.08
SNAPC4Q5SXM2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC40.57■■■■■ 4.08
SNAPC4Q5SXM2 AC021242.3-201ENST00000607598 1377 ntBASIC40.57■■■■■ 4.08
SNAPC4Q5SXM2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
SNAPC4Q5SXM2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC40.56■■■■■ 4.08
SNAPC4Q5SXM2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
SNAPC4Q5SXM2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC40.55■■■■■ 4.08
SNAPC4Q5SXM2 AC022616.5-201ENST00000518796 181 ntBASIC40.55■■■■■ 4.08
SNAPC4Q5SXM2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC40.55■■■■■ 4.08
SNAPC4Q5SXM2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC40.54■■■■■ 4.08
SNAPC4Q5SXM2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
SNAPC4Q5SXM2 WHAMMP3-201ENST00000611636 1609 ntBASIC40.54■■■■■ 4.08
SNAPC4Q5SXM2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
SNAPC4Q5SXM2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC40.53■■■■■ 4.08
SNAPC4Q5SXM2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC40.53■■■■■ 4.08
SNAPC4Q5SXM2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 SRR-208ENST00000576848 588 ntTSL 4 BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC40.52■■■■■ 4.08
SNAPC4Q5SXM2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC40.51■■■■■ 4.08
SNAPC4Q5SXM2 AL117332.1-201ENST00000622628 974 ntBASIC40.51■■■■■ 4.08
SNAPC4Q5SXM2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC40.51■■■■■ 4.07
SNAPC4Q5SXM2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC40.51■■■■■ 4.07
SNAPC4Q5SXM2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC40.5■■■■■ 4.07
SNAPC4Q5SXM2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC40.5■■■■■ 4.07
SNAPC4Q5SXM2 KRT18P24-201ENST00000344739 1156 ntBASIC40.5■■■■■ 4.07
SNAPC4Q5SXM2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC40.5■■■■■ 4.07
SNAPC4Q5SXM2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC40.49■■■■■ 4.07
SNAPC4Q5SXM2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC40.49■■■■■ 4.07
SNAPC4Q5SXM2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC40.49■■■■■ 4.07
SNAPC4Q5SXM2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC40.48■■■■■ 4.07
SNAPC4Q5SXM2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC40.48■■■■■ 4.07
SNAPC4Q5SXM2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC40.47■■■■■ 4.07
SNAPC4Q5SXM2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC40.46■■■■■ 4.07
SNAPC4Q5SXM2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC40.46■■■■■ 4.07
SNAPC4Q5SXM2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
SNAPC4Q5SXM2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC40.45■■■■■ 4.07
SNAPC4Q5SXM2 ABCB10P3-201ENST00000561950 2166 ntBASIC40.45■■■■■ 4.07
SNAPC4Q5SXM2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC40.45■■■■■ 4.07
SNAPC4Q5SXM2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
SNAPC4Q5SXM2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC40.44■■■■■ 4.06
SNAPC4Q5SXM2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
SNAPC4Q5SXM2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC40.44■■■■■ 4.06
SNAPC4Q5SXM2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC40.44■■■■■ 4.06
SNAPC4Q5SXM2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC40.44■■■■■ 4.06
SNAPC4Q5SXM2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC40.44■■■■■ 4.06
SNAPC4Q5SXM2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC40.43■■■■■ 4.06
SNAPC4Q5SXM2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
SNAPC4Q5SXM2 RARRES2P6-201ENST00000567333 442 ntBASIC40.43■■■■■ 4.06
SNAPC4Q5SXM2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC40.43■■■■■ 4.06
SNAPC4Q5SXM2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC40.43■■■■■ 4.06
SNAPC4Q5SXM2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC40.42■■■■■ 4.06
SNAPC4Q5SXM2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC40.42■■■■■ 4.06
SNAPC4Q5SXM2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC40.42■■■■■ 4.06
SNAPC4Q5SXM2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC40.42■■■■■ 4.06
SNAPC4Q5SXM2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC40.41■■■■■ 4.06
SNAPC4Q5SXM2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC40.4■■■■■ 4.06
SNAPC4Q5SXM2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC40.4■■■■■ 4.06
SNAPC4Q5SXM2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
SNAPC4Q5SXM2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC40.4■■■■■ 4.06
SNAPC4Q5SXM2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
SNAPC4Q5SXM2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC40.4■■■■■ 4.06
SNAPC4Q5SXM2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC40.39■■■■■ 4.06
SNAPC4Q5SXM2 AC005837.3-201ENST00000612163 286 ntBASIC40.39■■■■■ 4.06
SNAPC4Q5SXM2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC40.39■■■■■ 4.06
SNAPC4Q5SXM2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC40.39■■■■■ 4.06
SNAPC4Q5SXM2 AC096631.2-201ENST00000436136 790 ntBASIC40.39■■■■■ 4.06
SNAPC4Q5SXM2 AC092028.1-203ENST00000608262 953 ntBASIC40.39■■■■■ 4.06
SNAPC4Q5SXM2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 AC120024.1-201ENST00000562672 995 ntBASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC40.35■■■■■ 4.05
SNAPC4Q5SXM2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
SNAPC4Q5SXM2 MIR4466-201ENST00000606121 54 ntBASIC40.34■■■■■ 4.05
SNAPC4Q5SXM2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
SNAPC4Q5SXM2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC40.33■■■■■ 4.05
SNAPC4Q5SXM2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC40.33■■■■■ 4.05
SNAPC4Q5SXM2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC40.33■■■■■ 4.05
SNAPC4Q5SXM2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
SNAPC4Q5SXM2 MIR3621-201ENST00000580529 85 ntBASIC40.32■■■■■ 4.05
SNAPC4Q5SXM2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC40.32■■■■■ 4.05
SNAPC4Q5SXM2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC40.32■■■■■ 4.04
SNAPC4Q5SXM2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC40.31■■■■■ 4.04
SNAPC4Q5SXM2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC40.31■■■■■ 4.04
SNAPC4Q5SXM2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC40.31■■■■■ 4.04
SNAPC4Q5SXM2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC40.31■■■■■ 4.04
SNAPC4Q5SXM2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
SNAPC4Q5SXM2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
SNAPC4Q5SXM2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC40.31■■■■■ 4.04
SNAPC4Q5SXM2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
SNAPC4Q5SXM2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC40.3■■■■■ 4.04
SNAPC4Q5SXM2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC40.3■■■■■ 4.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms