Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
ATP6AP1LQ52LC2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6AP1LQ52LC2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.28■■□□□ 1.32
ATP6AP1LQ52LC2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.28■■□□□ 1.32
ATP6AP1LQ52LC2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6AP1LQ52LC2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
ATP6AP1LQ52LC2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6AP1LQ52LC2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 AC096887.2-201ENST00000623443 1957 ntBASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
ATP6AP1LQ52LC2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
ATP6AP1LQ52LC2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.31
ATP6AP1LQ52LC2 AC142381.3-201ENST00000568208 1670 ntBASIC23.26■■□□□ 1.31
ATP6AP1LQ52LC2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.26■■□□□ 1.31
ATP6AP1LQ52LC2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ATP6AP1LQ52LC2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ATP6AP1LQ52LC2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.26■■□□□ 1.31
ATP6AP1LQ52LC2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6AP1LQ52LC2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
ATP6AP1LQ52LC2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6AP1LQ52LC2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ATP6AP1LQ52LC2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6AP1LQ52LC2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 AC093323.1-202ENST00000635031 2045 ntBASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6AP1LQ52LC2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6AP1LQ52LC2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6AP1LQ52LC2 AC126177.7-201ENST00000547904 679 ntBASIC23.23■■□□□ 1.31
ATP6AP1LQ52LC2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.23■■□□□ 1.31
ATP6AP1LQ52LC2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6AP1LQ52LC2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6AP1LQ52LC2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 CR559946.2-201ENST00000623684 991 ntBASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ATP6AP1LQ52LC2 AC022211.4-201ENST00000625094 2161 ntBASIC23.21■■□□□ 1.31
ATP6AP1LQ52LC2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP6AP1LQ52LC2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6AP1LQ52LC2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP6AP1LQ52LC2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6AP1LQ52LC2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6AP1LQ52LC2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6AP1LQ52LC2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ATP6AP1LQ52LC2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6AP1LQ52LC2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6AP1LQ52LC2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ATP6AP1LQ52LC2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP6AP1LQ52LC2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6AP1LQ52LC2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6AP1LQ52LC2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6AP1LQ52LC2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6AP1LQ52LC2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6AP1LQ52LC2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP6AP1LQ52LC2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP6AP1LQ52LC2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6AP1LQ52LC2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms