Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC43.82■■■■■ 4.61
HMGXB3Q12766 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC43.81■■■■■ 4.6
HMGXB3Q12766 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC43.81■■■■■ 4.6
HMGXB3Q12766 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC43.81■■■■■ 4.6
HMGXB3Q12766 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC43.81■■■■■ 4.6
HMGXB3Q12766 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC43.8■■■■■ 4.6
HMGXB3Q12766 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC43.8■■■■■ 4.6
HMGXB3Q12766 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC43.79■■■■■ 4.6
HMGXB3Q12766 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC43.78■■■■■ 4.6
HMGXB3Q12766 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC43.77■■■■■ 4.6
HMGXB3Q12766 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC43.77■■■■■ 4.6
HMGXB3Q12766 RPP21-222ENST00000433076 577 ntTSL 2 BASIC43.77■■■■■ 4.6
HMGXB3Q12766 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC43.77■■■■■ 4.6
HMGXB3Q12766 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC43.77■■■■■ 4.6
HMGXB3Q12766 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC43.76■■■■■ 4.6
HMGXB3Q12766 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC43.76■■■■■ 4.6
HMGXB3Q12766 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC43.76■■■■■ 4.6
HMGXB3Q12766 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC43.76■■■■■ 4.6
HMGXB3Q12766 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC43.76■■■■■ 4.6
HMGXB3Q12766 AL117332.1-201ENST00000622628 974 ntBASIC43.75■■■■■ 4.59
HMGXB3Q12766 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC43.75■■■■■ 4.59
HMGXB3Q12766 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC43.74■■■■■ 4.59
HMGXB3Q12766 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC43.74■■■■■ 4.59
HMGXB3Q12766 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC43.74■■■■■ 4.59
HMGXB3Q12766 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC43.74■■■■■ 4.59
HMGXB3Q12766 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC43.73■■■■■ 4.59
HMGXB3Q12766 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC43.73■■■■■ 4.59
HMGXB3Q12766 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC43.73■■■■■ 4.59
HMGXB3Q12766 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC43.73■■■■■ 4.59
HMGXB3Q12766 ABCB10P3-201ENST00000561950 2166 ntBASIC43.73■■■■■ 4.59
HMGXB3Q12766 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC43.73■■■■■ 4.59
HMGXB3Q12766 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC43.73■■■■■ 4.59
HMGXB3Q12766 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.72■■■■■ 4.59
HMGXB3Q12766 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC43.72■■■■■ 4.59
HMGXB3Q12766 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC43.71■■■■■ 4.59
HMGXB3Q12766 TSPY9P-201ENST00000440215 945 ntBASIC43.71■■■■■ 4.59
HMGXB3Q12766 TSPY11P-201ENST00000442607 1045 ntBASIC43.71■■■■■ 4.59
HMGXB3Q12766 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC43.71■■■■■ 4.59
HMGXB3Q12766 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC43.71■■■■■ 4.59
HMGXB3Q12766 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC43.7■■■■■ 4.59
HMGXB3Q12766 AL136116.3-201ENST00000402907 1138 ntBASIC43.7■■■■■ 4.59
HMGXB3Q12766 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC43.7■■■■■ 4.59
HMGXB3Q12766 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC43.69■■■■■ 4.58
HMGXB3Q12766 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC43.69■■■■■ 4.58
HMGXB3Q12766 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC43.68■■■■■ 4.58
HMGXB3Q12766 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC43.67■■■■■ 4.58
HMGXB3Q12766 SRR-208ENST00000576848 588 ntTSL 4 BASIC43.67■■■■■ 4.58
HMGXB3Q12766 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC43.66■■■■■ 4.58
HMGXB3Q12766 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC43.66■■■■■ 4.58
HMGXB3Q12766 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC43.66■■■■■ 4.58
HMGXB3Q12766 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC43.66■■■■■ 4.58
HMGXB3Q12766 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC43.66■■■■■ 4.58
HMGXB3Q12766 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC43.66■■■■■ 4.58
HMGXB3Q12766 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC43.65■■■■■ 4.58
HMGXB3Q12766 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC43.65■■■■■ 4.58
HMGXB3Q12766 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC43.64■■■■■ 4.58
HMGXB3Q12766 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC43.64■■■■■ 4.58
HMGXB3Q12766 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC43.64■■■■■ 4.58
HMGXB3Q12766 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC43.64■■■■■ 4.58
HMGXB3Q12766 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC43.63■■■■■ 4.58
HMGXB3Q12766 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC43.63■■■■■ 4.58
HMGXB3Q12766 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC43.63■■■■■ 4.57
HMGXB3Q12766 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC43.63■■■■■ 4.57
HMGXB3Q12766 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC43.63■■■■■ 4.57
HMGXB3Q12766 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC43.62■■■■■ 4.57
HMGXB3Q12766 AC092028.1-203ENST00000608262 953 ntBASIC43.62■■■■■ 4.57
HMGXB3Q12766 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC43.62■■■■■ 4.57
HMGXB3Q12766 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC43.62■■■■■ 4.57
HMGXB3Q12766 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC43.61■■■■■ 4.57
HMGXB3Q12766 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC43.61■■■■■ 4.57
HMGXB3Q12766 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC43.6■■■■■ 4.57
HMGXB3Q12766 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC43.6■■■■■ 4.57
HMGXB3Q12766 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC43.59■■■■■ 4.57
HMGXB3Q12766 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC43.58■■■■■ 4.57
HMGXB3Q12766 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC43.58■■■■■ 4.57
HMGXB3Q12766 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC43.58■■■■■ 4.57
HMGXB3Q12766 AC120024.1-201ENST00000562672 995 ntBASIC43.58■■■■■ 4.57
HMGXB3Q12766 RARRES2P6-201ENST00000567333 442 ntBASIC43.58■■■■■ 4.57
HMGXB3Q12766 MIR3621-201ENST00000580529 85 ntBASIC43.58■■■■■ 4.57
HMGXB3Q12766 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC43.57■■■■■ 4.57
HMGXB3Q12766 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC43.57■■■■■ 4.57
HMGXB3Q12766 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC43.57■■■■■ 4.57
HMGXB3Q12766 MIR4281-201ENST00000580852 62 ntBASIC43.57■■■■■ 4.56
HMGXB3Q12766 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC43.56■■■■■ 4.56
HMGXB3Q12766 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC43.56■■■■■ 4.56
HMGXB3Q12766 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC43.56■■■■■ 4.56
HMGXB3Q12766 KRT18P10-201ENST00000388836 1287 ntBASIC43.55■■■■■ 4.56
HMGXB3Q12766 AL139393.2-201ENST00000608721 2025 ntBASIC43.55■■■■■ 4.56
HMGXB3Q12766 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC43.54■■■■■ 4.56
HMGXB3Q12766 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC43.54■■■■■ 4.56
HMGXB3Q12766 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC43.54■■■■■ 4.56
HMGXB3Q12766 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC43.53■■■■■ 4.56
HMGXB3Q12766 AL512631.2-201ENST00000604634 923 ntBASIC43.53■■■■■ 4.56
HMGXB3Q12766 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC43.53■■■■■ 4.56
HMGXB3Q12766 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC43.52■■■■■ 4.56
HMGXB3Q12766 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC43.52■■■■■ 4.56
HMGXB3Q12766 MIR4466-201ENST00000606121 54 ntBASIC43.52■■■■■ 4.56
HMGXB3Q12766 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC43.51■■■■■ 4.56
HMGXB3Q12766 AC133561.4-201ENST00000566112 224 ntBASIC43.51■■■■■ 4.56
HMGXB3Q12766 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC43.5■■■■■ 4.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms