Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN18P56856 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN18P56856 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLDN18P56856 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN18P56856 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN18P56856 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CLDN18P56856 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN18P56856 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN18P56856 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN18P56856 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN18P56856 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN18P56856 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN18P56856 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN18P56856 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN18P56856 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN18P56856 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN18P56856 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN18P56856 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN18P56856 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN18P56856 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN18P56856 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLDN18P56856 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLDN18P56856 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CLDN18P56856 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CLDN18P56856 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN18P56856 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.72■■□□□ 1.07
CLDN18P56856 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN18P56856 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN18P56856 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CLDN18P56856 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CLDN18P56856 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CLDN18P56856 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN18P56856 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN18P56856 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.71■■□□□ 1.07
CLDN18P56856 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.71■■□□□ 1.07
CLDN18P56856 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN18P56856 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CLDN18P56856 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN18P56856 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.7■■□□□ 1.06
CLDN18P56856 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLDN18P56856 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
CLDN18P56856 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN18P56856 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN18P56856 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
CLDN18P56856 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN18P56856 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN18P56856 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN18P56856 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN18P56856 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CLDN18P56856 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN18P56856 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN18P56856 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN18P56856 AL121749.1-202ENST00000609313 2153 ntBASIC21.67■■□□□ 1.06
CLDN18P56856 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN18P56856 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN18P56856 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN18P56856 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN18P56856 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN18P56856 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN18P56856 AC139795.1-202ENST00000500444 432 ntBASIC21.67■■□□□ 1.06
CLDN18P56856 BHLHE23-202ENST00000612929 1109 ntBASIC21.67■■□□□ 1.06
CLDN18P56856 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN18P56856 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CLDN18P56856 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN18P56856 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN18P56856 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN18P56856 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN18P56856 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN18P56856 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN18P56856 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN18P56856 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN18P56856 AC074183.2-201ENST00000623112 922 ntBASIC21.65■■□□□ 1.06
CLDN18P56856 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN18P56856 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLDN18P56856 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN18P56856 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN18P56856 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN18P56856 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CLDN18P56856 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN18P56856 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN18P56856 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN18P56856 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CLDN18P56856 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN18P56856 RPS2P7-201ENST00000447334 885 ntBASIC21.63■■□□□ 1.05
CLDN18P56856 AC087393.1-201ENST00000582896 145 ntBASIC21.63■■□□□ 1.05
CLDN18P56856 AC010980.1-201ENST00000587192 1142 ntBASIC21.63■■□□□ 1.05
CLDN18P56856 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLDN18P56856 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN18P56856 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN18P56856 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN18P56856 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN18P56856 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN18P56856 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN18P56856 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN18P56856 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN18P56856 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN18P56856 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN18P56856 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLDN18P56856 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN18P56856 KRT18P10-201ENST00000388836 1287 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms